The genome and variation of Bacillus anthracis

Paul S Keim, Jeffrey M. Gruendike, Alexandra M. Klevytska, James M. Schupp, Jean Challacombe, Richard Okinaka

Research output: Contribution to journalArticle

49 Citations (Scopus)

Abstract

The Bacillus anthracis genome reflects its close genetic ties to Bacillus cereus and Bacillus thuringiensis but has been shaped by its own unique biology and evolutionary forces. The genome is comprised of a chromosome and two large virulence plasmids, pXO1 and pXO2. The chromosome is mostly co-linear among B. anthracis strains and even with the closest near neighbor strains. An exception to this pattern has been observed in a large inversion in an attenuated strain suggesting that chromosome co-linearity is important to the natural biology of this pathogen. In general, there are few polymorphic nucleotides among B. anthracis strains reflecting the short evolutionary time since its derivation from a B. cereus-like ancestor. The exceptions to this lack of diversity are the variable number tandem repeat (VNTR) loci that exist in genic and non genic regions of the chromosome and both plasmids. Their variation is associated with high mutability that is driven by rapid insertion and deletion of the repeats within an array. A notable example is found in the vrrC locus which is homologous to known DNA translocase genes from other bacteria.

Original languageEnglish (US)
Pages (from-to)397-405
Number of pages9
JournalMolecular Aspects of Medicine
Volume30
Issue number6
DOIs
StatePublished - Dec 2009

Fingerprint

Bacillus anthracis
Bacilli
Chromosomes
Genes
Genome
Bacillus cereus
Plasmids
Minisatellite Repeats
Bacillus thuringiensis
Pathogens
Virulence
Bacteria
Nucleotides
DNA

Keywords

  • Chromosomal inversion
  • Phylogeny
  • Variable number tandem repeats

ASJC Scopus subject areas

  • Biochemistry
  • Molecular Biology
  • Molecular Medicine
  • Clinical Biochemistry
  • Medicine(all)

Cite this

Keim, P. S., Gruendike, J. M., Klevytska, A. M., Schupp, J. M., Challacombe, J., & Okinaka, R. (2009). The genome and variation of Bacillus anthracis. Molecular Aspects of Medicine, 30(6), 397-405. https://doi.org/10.1016/j.mam.2009.08.005

The genome and variation of Bacillus anthracis. / Keim, Paul S; Gruendike, Jeffrey M.; Klevytska, Alexandra M.; Schupp, James M.; Challacombe, Jean; Okinaka, Richard.

In: Molecular Aspects of Medicine, Vol. 30, No. 6, 12.2009, p. 397-405.

Research output: Contribution to journalArticle

Keim, PS, Gruendike, JM, Klevytska, AM, Schupp, JM, Challacombe, J & Okinaka, R 2009, 'The genome and variation of Bacillus anthracis', Molecular Aspects of Medicine, vol. 30, no. 6, pp. 397-405. https://doi.org/10.1016/j.mam.2009.08.005
Keim PS, Gruendike JM, Klevytska AM, Schupp JM, Challacombe J, Okinaka R. The genome and variation of Bacillus anthracis. Molecular Aspects of Medicine. 2009 Dec;30(6):397-405. https://doi.org/10.1016/j.mam.2009.08.005
Keim, Paul S ; Gruendike, Jeffrey M. ; Klevytska, Alexandra M. ; Schupp, James M. ; Challacombe, Jean ; Okinaka, Richard. / The genome and variation of Bacillus anthracis. In: Molecular Aspects of Medicine. 2009 ; Vol. 30, No. 6. pp. 397-405.
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