Single nucleotide polymorphism typing of Bacillus anthracis from Sverdlovsk tissue

Richard T. Okinaka, Melinda Henrie, Karen K. Hill, Kristin S. Lowery, Matthew Van Ert, Talima Pearson, James Schupp, Leo Kenefic, Jodi Beaudry, Steven A. Hofstadler, Paul J. Jackson, Paul Keim

Research output: Contribution to journalArticle

26 Scopus citations

Abstract

A small number of conserved canonical single nucleotide polymorphisms (canSNP) that define major phylogenetic branches for Bacillus anthracis were used to place a Sverdlovsk patient's B. anthracis genotype into 1 of 12 subgroups. Reconstruction of the pagA gene also showed a unique SNP that defines a new lineage for B. anthracis.

Original languageEnglish (US)
Pages (from-to)653-656
Number of pages4
JournalEmerging infectious diseases
Volume14
Issue number4
DOIs
StatePublished - Apr 2008

ASJC Scopus subject areas

  • Epidemiology
  • Microbiology (medical)
  • Infectious Diseases

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    Okinaka, R. T., Henrie, M., Hill, K. K., Lowery, K. S., Van Ert, M., Pearson, T., Schupp, J., Kenefic, L., Beaudry, J., Hofstadler, S. A., Jackson, P. J., & Keim, P. (2008). Single nucleotide polymorphism typing of Bacillus anthracis from Sverdlovsk tissue. Emerging infectious diseases, 14(4), 653-656. https://doi.org/10.3201/eid1404.070984