First draft genome sequence of a strain belonging to the Zoogloea genus and its gene expression in situ

Emilie E.L. Muller, Shaman Narayanasamy, Myriam Zeimes, Cédric C. Laczny, Laura A. Lebrun, Malte Herold, Nathan D. Hicks, John D. Gillece, James M. Schupp, Paul S Keim, Paul Wilmes

Research output: Contribution to journalArticle

1 Citation (Scopus)

Abstract

The Gram-negative beta-proteobacterium Zoogloea sp. LCSB751 (LMG 29444) was newly isolated from foaming activated sludge of a municipal wastewater treatment plant. Here, we describe its draft genome sequence and annotation together with a general physiological and genomic analysis, as the first sequenced representative of the Zoogloea genus. Moreover, Zoogloea sp. gene expression in its environment is described using metatranscriptomic data obtained from the same treatment plant. The presented genomic and transcriptomic information demonstrate a pronounced capacity of this genus to synthesize poly-β-hydroxyalkanoate within wastewater.

Original languageEnglish (US)
Article number64
JournalStandards in Genomic Sciences
Volume12
Issue number1
DOIs
StatePublished - Oct 18 2017
Externally publishedYes

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Zoogloea
Genome
Waste Water
Gene Expression
Betaproteobacteria
Sewage

Keywords

  • Genome assembly
  • Genomic features
  • Lipid metabolism
  • Metatranscriptomics
  • Poly-hydroxyalkanoate
  • Wastewater treatement plant

ASJC Scopus subject areas

  • Genetics

Cite this

Muller, E. E. L., Narayanasamy, S., Zeimes, M., Laczny, C. C., Lebrun, L. A., Herold, M., ... Wilmes, P. (2017). First draft genome sequence of a strain belonging to the Zoogloea genus and its gene expression in situ. Standards in Genomic Sciences, 12(1), [64]. https://doi.org/10.1186/s40793-017-0274-y

First draft genome sequence of a strain belonging to the Zoogloea genus and its gene expression in situ. / Muller, Emilie E.L.; Narayanasamy, Shaman; Zeimes, Myriam; Laczny, Cédric C.; Lebrun, Laura A.; Herold, Malte; Hicks, Nathan D.; Gillece, John D.; Schupp, James M.; Keim, Paul S; Wilmes, Paul.

In: Standards in Genomic Sciences, Vol. 12, No. 1, 64, 18.10.2017.

Research output: Contribution to journalArticle

Muller, EEL, Narayanasamy, S, Zeimes, M, Laczny, CC, Lebrun, LA, Herold, M, Hicks, ND, Gillece, JD, Schupp, JM, Keim, PS & Wilmes, P 2017, 'First draft genome sequence of a strain belonging to the Zoogloea genus and its gene expression in situ', Standards in Genomic Sciences, vol. 12, no. 1, 64. https://doi.org/10.1186/s40793-017-0274-y
Muller, Emilie E.L. ; Narayanasamy, Shaman ; Zeimes, Myriam ; Laczny, Cédric C. ; Lebrun, Laura A. ; Herold, Malte ; Hicks, Nathan D. ; Gillece, John D. ; Schupp, James M. ; Keim, Paul S ; Wilmes, Paul. / First draft genome sequence of a strain belonging to the Zoogloea genus and its gene expression in situ. In: Standards in Genomic Sciences. 2017 ; Vol. 12, No. 1.
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