Diverse genotypes of Yersinia pestis caused plague in Madagascar in 2007

Julia M. Riehm, Michaela Projahn, Amy J. Vogler, Minoaerisoa Rajerison, Genevieve Andersen, Carina M. Hall, Thomas Zimmermann, Rahelinirina Soanandrasana, Voahangy Andrianaivoarimanana, Reinhard K. Straubinger, Roxanne Nottingham, Paul S Keim, David M Wagner, Holger C. Scholz

Research output: Contribution to journalArticle

13 Scopus citations

Abstract

Background Yersinia pestis is the causative agent of human plague and is endemic in various African, Asian and American countries. In Madagascar, the disease represents a significant public health problem with hundreds of human cases a year. Unfortunately, poor infrastructure makes outbreak investigations challenging. Methodology/Principal Findings DNA was extracted directly from 93 clinical samples from patients with a clinical diagnosis of plague in Madagascar in 2007. The extracted DNAs were then genotyped using three molecular genotyping methods, including, single nucleotide polymorphism (SNP) typing, multi-locus variable-number tandem repeat analysis (MLVA), and Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR) analysis. These methods provided increasing resolution, respectively. The results of these analyses revealed that, in 2007, ten molecular groups, two newly described here and eight previously identified, were responsible for causing human plague in geographically distinct areas of Madagascar. Conclusions/Significance Plague in Madagascar is caused by numerous distinct types of Y. pestis. Genotyping method choice should be based upon the discriminatory power needed, expense, and available data for any desired comparisons. We conclude that genotyping should be a standard tool used in epidemiological investigations of plague outbreaks.

Original languageEnglish (US)
Article numbere0003844
JournalPLoS Neglected Tropical Diseases
Volume9
Issue number6
DOIs
StatePublished - Jun 12 2015

    Fingerprint

ASJC Scopus subject areas

  • Infectious Diseases
  • Public Health, Environmental and Occupational Health
  • Pharmacology, Toxicology and Pharmaceutics(all)

Cite this

Riehm, J. M., Projahn, M., Vogler, A. J., Rajerison, M., Andersen, G., Hall, C. M., Zimmermann, T., Soanandrasana, R., Andrianaivoarimanana, V., Straubinger, R. K., Nottingham, R., Keim, P. S., Wagner, D. M., & Scholz, H. C. (2015). Diverse genotypes of Yersinia pestis caused plague in Madagascar in 2007. PLoS Neglected Tropical Diseases, 9(6), [e0003844]. https://doi.org/10.1371/journal.pntd.0003844