Find Research Outputs

2018

Benthic walking, bounding, and maneuvering in flatfishes (Pleuronectiformes: Pleuronectidae): New vertebrate gaits

Fox, C. H., Gibb, A. C., Summers, A. P. & Bemis, W. E., Oct 1 2018, In : Zoology. 130, p. 19-29 11 p.

Research output: Contribution to journalArticle

Pleuronectidae
Pleuronectiformes
gait
walking
fins
42 Citations (Scopus)

Best practices for analysing microbiomes

Knight, R., Vrbanac, A., Taylor, B. C., Aksenov, A., Callewaert, C., Debelius, J., Gonzalez, A., Kosciolek, T., McCall, L. I., McDonald, D., Melnik, A. V., Morton, J. T., Navas, J., Quinn, R. A., Sanders, J. G., Swafford, A. D., Thompson, L. R., Tripathi, A., Xu, Z. Z., Zaneveld, J. R. & 3 othersZhu, Q., Caporaso, J. G. & Dorrestein, P. C., May 23 2018, (Accepted/In press) In : Nature Reviews Microbiology. p. 1-13 13 p.

Research output: Contribution to journalArticle

Microbiota
Practice Guidelines
Research Design
Technology
Metagenomics
1 Citation (Scopus)

Be There For Me and I Will Be There For You: Friendship Maintenance Mediates the Relationship Between Capitalization and Happiness

Demir, M., Tyra, A. & Özen-Çıplak, A., Jan 10 2018, (Accepted/In press) In : Journal of Happiness Studies. p. 1-21 21 p.

Research output: Contribution to journalArticle

happiness
friendship
experience
event

Bioclimatic envelopes for individual demographic events driven by extremes: Plant mortality from drought and warming

Law, D. J., Adams, H. D., Breshears, D. D., Cobb, N. S., Bradford, J. B., Zou, C. B., Field, J. P., Gardea, A. A., Williams, A. P. & Huxman, T. E., Jan 1 2018, (Accepted/In press) In : International Journal of Plant Sciences.

Research output: Contribution to journalArticle

demographic statistics
warming
drought
mortality
extreme event
2 Citations (Scopus)

Biocrust-forming mosses mitigate the impact of aridity on soil microbial communities in drylands: Observational evidence from three continents

Delgado-Baquerizo, M., Maestre, F. T., Eldridge, D. J., Bowker, M. A., Jeffries, T. C. & Singh, B. K., Jan 1 2018, (Accepted/In press) In : New Phytologist.

Research output: Contribution to journalArticle

Bryophyta
dry environmental conditions
arid lands
mosses and liverworts
microbial communities
3 Citations (Scopus)

Biocrusts: the living skin of the earth

Bowker, M. A., Reed, S. C., Maestre, F. T. & Eldridge, D. J., Aug 1 2018, In : Plant and Soil. 429, 1-2

Research output: Contribution to journalEditorial

skin
1 Citation (Scopus)

Borrelia miyamotoi Infections in Small Mammals, California, USA

Salkeld, D. J., Nieto, N. C., Bonilla, D. L., Yoshimizu, M. H. & Padgett, K. A., Dec 1 2018, In : Emerging Infectious Diseases. 24, 12, p. 2356-2359 4 p.

Research output: Contribution to journalArticle

Borrelia Infections
Mammals
Borrelia
Infection

Botulinum neurotoxin-producing bacteria. Isn’t it time that we called a species a species?

Smith, T., Williamson, C. H. D., Hill, K., Sahl, J. & Keim, P. S., Sep 1 2018, In : mBio. 9, 5, e01469-18.

Research output: Contribution to journalArticle

Neurotoxins
Clostridium botulinum
Bacteria
Terminology
Names

Brad McRae (1966-2017)

Novembre, J., Beier, P., Fargione, J., Lawler, J. & Selkoe, K., Aug 1 2018, In : Molecular ecology. 27, 15, p. 3035-3036 2 p.

Research output: Contribution to journalArticle

Branding K-REDD+ and its implications for South Korea's middle power diplomacy

Kim, Y-S., Bae, J. S., Fisher, L. A. & Jung, J., Jan 1 2018, (Accepted/In press) In : Pacific Review. p. 1-14 14 p.

Research output: Contribution to journalArticle

diplomacy
South Korea
climate change
Korea
collective action
2 Citations (Scopus)

Breaching of strike-slip faults and successive flooding of pull-apart basins to form the Gulf of California seaway from ca. 8-6 Ma

Umhoefer, P. J., Darin, M. H., Bennett, S. E. K., Skinner, L. A., Dorsey, R. J. & Oskin, M. E., Aug 1 2018, In : Geology. 46, 8, p. 695-698 4 p.

Research output: Contribution to journalArticle

pull apart basin
strike-slip fault
flooding
basin
plate boundary
1 Citation (Scopus)

Building Intelligence in Automated Traffic Signal Performance Measures with Advanced Data Analytics

Huang, T., Poddar, S., Aguilar, C., Sharma, A., Smaglik, E. J., Kothuri, S. & Koonce, P., Jan 1 2018, (Accepted/In press) In : Transportation Research Record.

Research output: Contribution to journalArticle

Traffic signals
Data visualization
Quality control
Learning systems
Controllers

Burkholderia pseudomallei distribution in australasia is linked to paleogeographic and anthropogenic history

Baker, A. L., Pearson, T. R., Sahl, J. W., Hepp, C., Price, E. P., Sarovich, D. S., Mayo, M., Tuanyok, A., Currie, B. J., Keim, P. S. & Warner, J., Nov 1 2018, In : PLoS One. 13, 11, e0206845.

Research output: Contribution to journalArticle

Burkholderia pseudomallei
Australasia
Long Term Evolution (LTE)
Australasian region
New Guinea
2 Citations (Scopus)

Calcium increases titin N2A binding to F-actin and regulated thin filaments

Dutta, S., Tsiros, C., Sundar, S. L., Athar, H., Moore, J., Nelson, B. A., Gage, M. J. & Nishikawa, K. C., Dec 1 2018, In : Scientific Reports. 8, 1, 14575.

Research output: Contribution to journalArticle

Connectin
Actins
Calcium
Muscle Contraction
Spectrum Analysis

Calibration of a simple directional distortional hardening model for metal plasticity

Parma, S., Plešek, J., Marek, R., Hrubý, Z., Feigenbaum, H. P. & Dafalias, Y. F., Jan 1 2018, (Accepted/In press) In : International Journal of Solids and Structures.

Research output: Contribution to journalArticle

Hardening
plastic properties
Plasticity
hardening
Calibration
2 Citations (Scopus)

Can land management buffer impacts of climate changes and altered fire regimes on ecosystems of the Southwestern United States?

Loehman, R., Flatley, W., Holsinger, L. & Thode, A. E., Apr 7 2018, In : Forests. 9, 4, 192.

Research output: Contribution to journalArticle

Southwestern United States
fire regime
land management
buffers
climate change
2 Citations (Scopus)

Capturing arthropod diversity in complex cave systems

Wynne, J. J., Sommer, S. A., Howarth, F. G., Dickson, B. G. & Voyles, K. D., Jan 1 2018, (Accepted/In press) In : Diversity and Distributions.

Research output: Contribution to journalArticle

cave system
caves
arthropod
cave
arthropods
Pennsylvanian
canyon
new genus
new species
Serpukhovian
1 Citation (Scopus)

Case study: A bio-inspired control algorithm for a robotic foot-ankle prosthesis provides adaptive control of level walking and stair ascent

Tahir, U., Hessel, A. L., Lockwood, E. R., Tester, J., Han, Z., Rivera, D. J., Covey, K. L., Huck, T. G., Rice, N. A. & Nishikawa, K. C., Jan 1 2018, In : Frontiers Robotics AI. 5, APR, 36.

Research output: Contribution to journalArticle

Biocontrol
Stairs
Filament winding
Robotics
Muscle
2 Citations (Scopus)

Challenged and changed: Quiet ego and posttraumatic growth in mothers raising children with autism spectrum disorder

Wayment, H. A., Al-Kire, R. & Brookshire, K., Mar 1 2018, (Accepted/In press) In : Autism.

Research output: Contribution to journalArticle

Ego
Mothers
Growth
Social Support
Motivation
Challenger
Business-to-business relationships
Customer value
Customer engagement
Value creation
3 Citations (Scopus)

Changes in potential wildland fire suppression costs due to restoration treatments in Northern Arizona Ponderosa pine forests

Fitch, R. A., Kim, Y-S., Waltz, A. E. M. & Crouse, J. E., Feb 1 2018, In : Forest Policy and Economics. 87, p. 101-114 14 p.

Research output: Contribution to journalArticle

fire suppression
Pinus ponderosa
wildfires
suppression
wildfire
3 Citations (Scopus)

Characterization and hydraulic behaviour of the complex karst of the Kaibab Plateau and Grand Canyon National Park, USA

Jones, C. J. R., Springer, A. E., Tobin, B. W., Zappitello, S. J. & Jones, N. A., Jan 1 2018, Geological Society Special Publication. 1 ed. Geological Society of London, p. 237-260 24 p. (Geological Society Special Publication; vol. 466, no. 1).

Research output: Chapter in Book/Report/Conference proceedingChapter

canyon
karst
national park
Aquifers
Hydraulics

Characterization of the Martensitic Transformation in NiPtAl Alloy Using Digital Holographic Imaging

Thiesing, B. P., Dryepondt, S., Leonard, D., Dinwiddie, R. B. & Mann, C. J., Jan 1 2018, (Accepted/In press) In : Metallurgical and Materials Transactions A: Physical Metallurgy and Materials Science.

Research output: Contribution to journalArticle

Martensitic transformations
martensitic transformation
Martensite
martensite
Imaging techniques
3 Citations (Scopus)

Chronic nitrogen addition induces a cascade of plant community responses with both seasonal and progressive dynamics

Zhou, X., Bowker, M. A., Tao, Y., Wu, L. & Zhang, Y., Jun 1 2018, In : Science of the Total Environment. 626, p. 99-108 10 p.

Research output: Contribution to journalArticle

community response
plant community
Nitrogen
Biomass
nitrogen
1 Citation (Scopus)

Circuit-theory applications to connectivity science and conservation

Dickson, B. G., Albano, C. M., Anantharaman, R., Beier, P., Fargione, J., Graves, T. A., Gray, M. E., Hall, K. R., Lawler, J. J., Leonard, P. B., Littlefield, C. E., McClure, M. L., Novembre, J., Schloss, C. A., Schumaker, N. H., Shah, V. B. & Theobald, D. M., Jan 1 2018, (Accepted/In press) In : Conservation Biology.

Research output: Contribution to journalArticle

connectivity
electronic circuits
fire behavior
conservation practices
organisms

Coastal flooding and the 1861-2 California storm season

Reynolds, L. C., Simms, A. R., Ejarque, A., King, B., Anderson, S. R., Carlin, J. A., Bentz, J. M., Rockwell, T. K. & Peters, R., Jun 1 2018, In : Marine Geology. 400, p. 49-59 11 p.

Research output: Contribution to journalArticle

flooding
Deposits
washover
Tsunamis
coast

Coinfections identified from metagenomic analysis of cervical lymph nodes from tularemia patients

Birdsell, D. N., Özsürekci, Y., Rawat, A., Aycan, A. E., Mitchell, C. L., Sahl, J. W., Johansson, A., Colman, R. E., Schupp, J. M., Ceyhan, M., Keim, P. S. & Wagner, D. M., Jul 11 2018, In : BMC Infectious Diseases. 18, 1, 319.

Research output: Contribution to journalArticle

Tularemia
Metagenomics
Coinfection
Firearms
Lymph Nodes

Commentaries on health services research

Doran, T., Rohrs, R., Hooker, R. S. & Dehn, R. W., Dec 1 2018, In : JAAPA : official journal of the American Academy of Physician Assistants. 31, 12, p. 1-3 3 p.

Research output: Contribution to journalArticle

Health Services Research

Commentaries on health services research

Coplan, B., Dehn, R. W. & Hooker, R. S., Jan 1 2018, In : Journal of the American Academy of Physician Assistants. 31, 1, p. 53-54 2 p.

Research output: Contribution to journalComment/debate

Health Services Research

Commentaries on health services research

Bushardt, R. L., Cawley, J. F. & Dehn, R. W., May 1 2018, In : Journal of the American Academy of Physician Assistants. 31, 5

Research output: Contribution to journalArticle

Health Services Research
Quality of Health Care
Physicians
Inpatients
Length of Stay

Common garden experiments disentangle plant genetic and environmental contributions to ectomycorrhizal fungal community structure

Patterson, A., Flores-Rentería, L., Whipple, A. V., Whitham, T. G. & Gehring, C. A., Jan 1 2018, (Accepted/In press) In : New Phytologist.

Research output: Contribution to journalArticle

Fungal Structures
plant genetics
fungal communities
Seedlings
gardens

Community responses

Nielsen, M. O. & Jarratt Snider, K., Jan 1 2018, Crime and Social Justice in Indian Country. University of Arizona Press, p. 117-119 3 p.

Research output: Chapter in Book/Report/Conference proceedingForeword/postscript

community

Comparative pan-genomic analyses of Orientia tsutsugamushi reveal an exceptional model of bacterial evolution driving genomic diversity

Fleshman, A., Mullins, K., Sahl, J., Hepp, C., Nieto, N. C., Wiggins, K., Hornstra, H., Kelly, D., Chan, T. C., Phetsouvanh, R., Dittrich, S., Panyanivong, P., Paris, D., Newton, P., Richards, A. & Pearson, T. R., Sep 1 2018, In : Microbial genomics. 4, 9

Research output: Contribution to journalArticle

Orientia tsutsugamushi
Horizontal Gene Transfer
Genome
Trombiculidae
Scrub Typhus
2 Citations (Scopus)

Comparing the quality of collaborative writing, collaborative prewriting, and individual texts in a Thai EFL context

McDonough, K., De Vleeschauwer, J. & Crawford, W. J., Jun 1 2018, In : System. 74, p. 109-120 12 p.

Research output: Contribution to journalArticle

Thailand
student
rating
EFL Context
Collaborative Writing
sampling
Pinus ponderosa
soil enzymes
comparison
tree age

Complete genome sequence of the environmental Burkholderia pseudomallei sequence type 131 isolate MSHR1435, associated with a chronic melioidosis infection

Sahl, J. W., Mayo, M., Price, E. P., Sarovich, D. S., Kaestli, M., Pearson, T. R., Williamson, C. H. D., Nottingham, R., Sheridan, K., Wagner, D. M., Currie, B. J. & Keim, P. S., Mar 1 2018, In : Genome Announcements. 6, 11, e00072-18.

Research output: Contribution to journalArticle

Melioidosis
Burkholderia pseudomallei
Burkholderia Infections
Genome
Infection

Conclusion

Nielsen, M. O. & Jarratt Snider, K., Jan 1 2018, Crime and Social Justice in Indian Country. University of Arizona Press, p. 185-193 9 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2 Citations (Scopus)

Conclusion: Data, open science, and methodological reform in second language acquisition research

Marsden, E. & Plonsky, L. D., Jan 1 2018, Language Learning and Language Teaching. John Benjamins Publishing Company, Vol. 51. p. 219-228 10 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

language acquisition
Language
reform
science
Research
2 Citations (Scopus)

Conifer radial growth response to recent seasonal warming and drought from the southwestern USA

Truettner, C., Anderegg, W. R. L., Biondi, F., Koch, G. W., Ogle, K., Schwalm, C. R., Litvak, M. E., Shaw, J. D. & Ziaco, E., Jan 1 2018, (Accepted/In press) In : Forest Ecology and Management.

Research output: Contribution to journalArticle

warm season
Juniperus osteosperma
growth response
cold season
conifers
4 Citations (Scopus)

Constraints on the Density and Internal Strength of 1I/'Oumuamua

McNeill, A., Trilling, D. E. & Mommert, M., Apr 10 2018, In : Astrophysical Journal Letters. 857, 1, L1.

Research output: Contribution to journalArticle

ellipsoids
asteroids
eccentricity
surface properties
light curve

Contribution of environmental forcings to US runoff changes for the period 1950-2010

Forbes, W. L., Mao, J., Jin, M., Kao, S. C., Fu, W., Shi, X., Riccuito, D. M., Thornton, P. E., Ribes, A., Wang, Y., Piao, S., Zhao, T., Schwalm, C. R., Hoffman, F. M., Fisher, J. B., Ito, A., Poulter, B., Fang, Y., Tian, H., Jain, A. K. & 1 othersHayes, D. J., May 1 2018, In : Environmental Research Letters. 13, 5, 054023.

Research output: Contribution to journalArticle

Runoff
runoff
Climate Change
autumn
Climate

Corrigendum: Comparative pan-genomic analyses of Orientia tsutsugamushi reveal an exceptional model of bacterial evolution driving genomic diversity

Fleshman, A., Mullins, K., Sahl, J., Hepp, C., Nieto, N. C., Wiggins, K., Hornstra, H., Kelly, D., Chan, T. C., Phetsouvanh, R., Dittrich, S., Panyanivong, P., Paris, D., Newton, P., Richards, A. & Pearson, T. R., Oct 1 2018, In : Microbial genomics. 4, 10

Research output: Contribution to journalArticle

Orientia tsutsugamushi
Scrub Typhus
Horizontal Gene Transfer
corrigendum

Creativity and censorship laws: Lessons from the 1920s

Paxton, N. L., Jan 25 2018, Law and Literature. Cambridge University Press, p. 322-337 16 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

1920s
Censorship
Creativity

Crime

Nielsen, M. O. & Jarratt Snider, K., Jan 1 2018, Crime and Social Justice in Indian Country. University of Arizona Press, p. 15-19 5 p.

Research output: Chapter in Book/Report/Conference proceedingForeword/postscript

offense
social justice
justice
offense
community
stalking

Cryptic connections illuminate pathogen transmission within community networks

Hoyt, J. R., Langwig, K. E., White, J. P., Kaarakka, H. M., Redell, J. A., Kurta, A., DePue, J. E., Scullon, W. H., Parise, K. L., Foster, J. T., Frick, W. F. & Kilpatrick, A. M., Nov 29 2018, In : Nature. 563, 7733, p. 710-713 4 p.

Research output: Contribution to journalLetter

Community Networks
Infectious Disease Transmission
Nose
Population
Social Support

Current progress and future opportunities in applications of bioinformatics for biodefense and pathogen detection: Report from the Winter Mid-Atlantic Microbiome Meet-up, College Park, MD, January 10, 2018

Meisel, J. S., Nasko, D. J., Brubach, B., Cepeda-Espinoza, V., Chopyk, J., Corrada-Bravo, H., Fedarko, M., Ghurye, J., Javkar, K., Olson, N. D., Shah, N., Allard, S. M., Bazinet, A. L., Bergman, N. H., Brown, A., Caporaso, J. G., Conlan, S., Diruggiero, J., Forry, S. P., Hasan, N. A. & 16 othersKralj, J., Luethy, P. M., Milton, D. K., Ondov, B. D., Preheim, S., Ratnayake, S., Rogers, S. M., Rosovitz, M. J., Sakowski, E. G., Schliebs, N. O., Sommer, D. D., Ternus, K. L., Uritskiy, G., Zhang, S. X., Pop, M. & Treangen, T. J., Nov 5 2018, In : Microbiome. 6, 1, 197.

Research output: Contribution to journalArticle

Open Access
Microbiota
Computational Biology
Metagenomics
Communicable Diseases
Information Dissemination
80 Citations (Scopus)

Current understanding of the human microbiome

Gilbert, J. A., Blaser, M. J., Caporaso, J. G., Jansson, J. K., Lynch, S. V. & Knight, R., Apr 10 2018, In : Nature Medicine. 24, 4, p. 392-400 9 p.

Research output: Contribution to journalArticle

Microbiota
Microbial Genome
Aptitude
Metabolome
Gene Expression Profiling
4 Citations (Scopus)

Deadlock opportunism in contesting conservation areas in Indonesia

Sahide, M. A. K., Fisher, M. R., Maryudi, A., Dhiaulhaq, A., Wulandari, C., Kim, Y-S. & Giessen, L., Sep 1 2018, In : Land Use Policy. 77, p. 412-424 13 p.

Research output: Contribution to journalArticle

opportunism
social forestry
Indonesia
protected area
conservation areas