• 29356 Citations
  • 45 h-Index
If you made any changes in Pure, your changes will be visible here soon.

Fingerprint Fingerprint is based on mining the text of the experts' scientific documents to create an index of weighted terms, which defines the key subjects of each individual researcher.

Microbiota Medicine & Life Sciences
Ecology Medicine & Life Sciences
microbial communities Agriculture & Biology
rRNA Genes Medicine & Life Sciences
microbial community Earth & Environmental Sciences
Soil Medicine & Life Sciences
Ecosystem Medicine & Life Sciences
bacterial communities Agriculture & Biology

Network Recent external collaboration on country level. Dive into details by clicking on the dots.

Research Output 2005 2018

20 Citations

Best practices for analysing microbiomes

Knight, R., Vrbanac, A., Taylor, B. C., Aksenov, A., Callewaert, C., Debelius, J., Gonzalez, A., Kosciolek, T., McCall, L. I., McDonald, D., Melnik, A. V., Morton, J. T., Navas, J., Quinn, R. A., Sanders, J. G., Swafford, A. D., Thompson, L. R., Tripathi, A., Xu, Z. Z., Zaneveld, J. R. & 3 othersZhu, Q., Caporaso, J. G. & Dorrestein, P. C., May 23 2018, (Accepted/In press) In : Nature Reviews Microbiology. p. 1-13 13 p.

Research output: Contribution to journalArticle

Practice Guidelines
Research Design
38 Citations

Current understanding of the human microbiome

Gilbert, J. A., Blaser, M. J., Caporaso, J. G., Jansson, J. K., Lynch, S. V. & Knight, R., Apr 10 2018, In : Nature Medicine. 24, 4, p. 392-400 9 p.

Research output: Contribution to journalArticle

Microbial Genome
Gene Expression Profiling
9 Citations

Optimizing taxonomic classification of marker-gene amplicon sequences with QIIME 2's q2-feature-classifier plugin

Bokulich, N. A., Kaehler, B. D., Rideout, J. R., Dillon, M., Bolyen, E., Knight, R., Huttley, G. A. & Caporaso, J. G., May 17 2018, In : Microbiome. 6, 1, 90.

Research output: Contribution to journalArticle

Machine Learning
1 Citations

Qiita: rapid, web-enabled microbiome meta-analysis

Gonzalez, A., Navas-Molina, J. A., Kosciolek, T., McDonald, D., Vázquez-Baeza, Y., Ackermann, G., DeReus, J., Janssen, S., Swafford, A. D., Orchanian, S. B., Sanders, J. G., Shorenstein, J., Holste, H., Petrus, S., Robbins-Pianka, A., Brislawn, C. J., Wang, M., Rideout, J. R., Bolyen, E., Dillon, M. & 3 othersCaporaso, J. G., Dorrestein, P. C. & Knight, R., Oct 1 2018, In : Nature Methods. 15, 10, p. 796-798 3 p.

Research output: Contribution to journalArticle

Chemical analysis
3 Citations

Species-level functional profiling of metagenomes and metatranscriptomes

Franzosa, E. A., McIver, L. J., Rahnavard, G., Thompson, L. R., Schirmer, M., Weingart, G., Lipson, K. S., Knight, R., Caporaso, J. G., Segata, N. & Huttenhower, C., Nov 1 2018, In : Nature Methods. 15, 11, p. 962-968 7 p.

Research output: Contribution to journalArticle