Research Output

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Comment/debate
2020

Erratum: The Extended Specimen Network: A Strategy to Enhance US Biodiversity Collections, Promote Research and Education (BioScience DOI: 10.1093/biosci/biz140

Lendemer, J., Thiers, B., Monfils, A. K., Zaspel, J., Ellwood, E. R., Bentley, A., Levan, K., Bates, J., Jennings, D., Contreras, D., Lagomarsino, L., Mabee, P., Ford, L. S., Guralnick, R., Gropp, R. E., Revelez, M., Cobb, N., Seltmann, K. & Catherine Aime, M., Feb 1 2020, In : BioScience. 70, 2, 1 p.

Research output: Contribution to journalComment/debate

Open Access
2019

Author Correction: Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2 (Nature Biotechnology, (2019), 37, 8, (852-857), 10.1038/s41587-019-0209-9)

Bolyen, E., Rideout, J. R., Dillon, M. R., Bokulich, N. A., Abnet, C. C., Al-Ghalith, G. A., Alexander, H., Alm, E. J., Arumugam, M., Asnicar, F., Bai, Y., Bisanz, J. E., Bittinger, K., Brejnrod, A., Brislawn, C. J., Brown, C. T., Callahan, B. J., Caraballo-Rodríguez, A. M., Chase, J., Cope, E. K. & 92 others, Da Silva, R., Diener, C., Dorrestein, P. C., Douglas, G. M., Durall, D. M., Duvallet, C., Edwardson, C. F., Ernst, M., Estaki, M., Fouquier, J., Gauglitz, J. M., Gibbons, S. M., Gibson, D. L., Gonzalez, A., Gorlick, K., Guo, J., Hillmann, B., Holmes, S., Holste, H., Huttenhower, C., Huttley, G. A., Janssen, S., Jarmusch, A. K., Jiang, L., Kaehler, B. D., Kang, K. B., Keefe, C. R., Keim, P., Kelley, S. T., Knights, D., Koester, I., Kosciolek, T., Kreps, J., Langille, M. G. I., Lee, J., Ley, R., Liu, Y. X., Loftfield, E., Lozupone, C., Maher, M., Marotz, C., Martin, B. D., McDonald, D., McIver, L. J., Melnik, A. V., Metcalf, J. L., Morgan, S. C., Morton, J. T., Naimey, A. T., Navas-Molina, J. A., Nothias, L. F., Orchanian, S. B., Pearson, T., Peoples, S. L., Petras, D., Preuss, M. L., Pruesse, E., Rasmussen, L. B., Rivers, A., Robeson, M. S., Rosenthal, P., Segata, N., Shaffer, M., Shiffer, A., Sinha, R., Song, S. J., Spear, J. R., Swafford, A. D., Thompson, L. R., Torres, P. J., Trinh, P., Tripathi, A., Turnbaugh, P. J., Ul-Hasan, S., van der Hooft, J. J. J., Vargas, F., Vázquez-Baeza, Y., Vogtmann, E., von Hippel, M., Walters, W., Wan, Y., Wang, M., Warren, J., Weber, K. C., Williamson, C. H. D., Willis, A. D., Xu, Z. Z., Zaneveld, J. R., Zhang, Y., Zhu, Q., Knight, R. & Caporaso, J. G., Sep 1 2019, In : Nature Biotechnology. 37, 9, 1 p.

Research output: Contribution to journalComment/debate

Open Access
2 Scopus citations

Erratum to: Cryptic connections illuminate pathogen transmission within community networks (Nature, (2018), 563, 7733, (710-713), 10.1038/s41586-018-0720-z)

Hoyt, J. R., Langwig, K. E., White, J. P., Kaarakka, H. M., Redell, J. A., Kurta, A., DePue, J. E., Scullon, W. H., Parise, K. L., Foster, J. T., Frick, W. F. & Kilpatrick, A. M., Feb 7 2019, In : Nature. 566, 7742, p. E3

Research output: Contribution to journalComment/debate

Managing for disturbance stabilizes forest carbon

Hurteau, M. D., North, M. P., Koch, G. W. & Hungate, B. A., Jan 1 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 21, p. 10193-10195 3 p.

Research output: Contribution to journalComment/debate

Open Access
5 Scopus citations
2018

Corrigendum: Comparative pan-genomic analyses of Orientia tsutsugamushi reveal an exceptional model of bacterial evolution driving genomic diversity

Fleshman, A., Mullins, K., Sahl, J., Hepp, C., Nieto, N., Wiggins, K., Hornstra, H., Kelly, D., Chan, T. C., Phetsouvanh, R., Dittrich, S., Panyanivong, P., Paris, D., Newton, P., Richards, A. & Pearson, T., Oct 1 2018, In : Microbial Genomics. 4, 10

Research output: Contribution to journalComment/debate

2 Scopus citations

Erratum: Author Correction: Evolutionary history of plant hosts and fungal symbionts predicts the strength of mycorrhizal mutualism

Hoeksema, J. D., Bever, J. D., Chakraborty, S., Chaudhary, V. B., Gardes, M., Gehring, C. A., Hart, M. M., Housworth, E. A., Kaonongbua, W., Klironomos, J. N., Lajeunesse, M. J., Meadow, J., Milligan, B. G., Piculell, B. J., Pringle, A., Rúa, M. A., Umbanhowar, J., Viechtbauer, W., Wang, Y. W., Wilson, G. W. T. & 1 others, Zee, P. C., Jan 1 2018, In : Communications biology. 1, 1 p.

Research output: Contribution to journalComment/debate

Open Access
2017

Response to Comment on "Mycorrhizal association as a primary control of the CO2 fertilization effect"

Terrer, C., Vicca, S., Hungate, B. A., Phillips, R. P., Reich, P. B., Franklin, O., Stocker, B. D., Fisher, J. B. & Prentice, I. C., Jan 27 2017, In : Science (New York, N.Y.). 355, 6323, 1 p.

Research output: Contribution to journalComment/debate

4 Scopus citations

Sequestering Soil Organic Carbon: A Nitrogen Dilemma

Van Groenigen, J. W., Van Kessel, C., Hungate, B. A., Oenema, O., Powlson, D. S. & Van Groenigen, K. J., May 2 2017, In : Environmental Science and Technology. 51, 9, p. 4738-4739 2 p.

Research output: Contribution to journalComment/debate

67 Scopus citations
2016

Correction: Johnson et al., Complete genome sequences for 59 burkholderia isolates, both pathogenic and near neighbor [Genome Announcements, 3, 2, e00159-15, (2015)]doi 10.1128/genomeA.00159-15

Johnson, S. L., Bishop-Lilly, K. A., Ladner, J. T., Daligault, H. E., Davenport, K. W., Jaissle, J., Frey, K. G., Koroleva, G. I., Bruce, D. C., Coyne, S. R., Broomall, S. M., Ketheesan, N., Mayo, M., Hoffmaster, A., Elrod, M. G., Wuthiekanun, V., Tuanyok, A., Norton, R., Currie, B. J., Wagner, D. M. & 10 others, Keim, P., Li, P. E., Teshima, H., Gibbons, H. S., Palacios, G. F., Nicole Rosenzweig, C., Redden, C. L., Xu, Y., Minogue, T. D. & Chain, P. S., Jan 1 2016, In : Genome Announcements. 4, 2, e00313-16.

Research output: Contribution to journalComment/debate

1 Scopus citations

Thamnophis eques megalops (northern Mexican gartersnake). Predation

Emmons, I. D., Nowak, E. M. & Theimer, T., Sep 1 2016, In : Herpetological Review. 47, 3, p. 485-486 2 p.

Research output: Contribution to journalComment/debate

2015

Ominous projections for global antibiotic use in food-animal production

Price, L. B., Koch, B. J. & Hungate, B. A., May 5 2015, In : Proceedings of the National Academy of Sciences of the United States of America. 112, 18, p. 5554-5555 2 p.

Research output: Contribution to journalComment/debate

18 Scopus citations

Tickborne relapsing fever outbreak at an outdoor education camp — Arizona, 2014

Jones, J. M., Schumacher, M., Peoples, M., Souders, N., Horn, K., Fox, L., Scott, M., Brady, S., Weiss, J., Komatsu, K. & Nieto, N., Jan 1 2015, In : Morbidity and Mortality Weekly Report. 64, 23, p. 651-652 2 p.

Research output: Contribution to journalComment/debate

4 Scopus citations
2014

Krogh 1929 or 'The Krogh Principle'

Lindstedt, S., May 15 2014, In : Journal of Experimental Biology. 217, 10, p. 1640-1641 2 p.

Research output: Contribution to journalComment/debate

7 Scopus citations
2013

Erratum: Response to creatine kinase and pressor response to orthostatic tolerance (Hypertension (2013) (e25))

Okada, Y., Galbreath, M. M., Jarvis, S. S., Bivens, T. B., Vongpatanasin, W., Levine, B. D. & Fu, Q., May 1 2013, In : Hypertension. 61, 5, p. e47

Research output: Contribution to journalComment/debate

2012

Corrigendum to " Decreased streamflow in semi-arid basins following drought-induced tree die-off: A counter-intuitive and indirect climate impact on hydrology" [J. Hydrol. 406 (3-4) (2011) 225-233]

Guardiola-Claramonte, M., Troch, P. A., Breshears, D. D., Huxman, T. E., Switanek, M. B., Durcik, M. & Cobb, N. S., Jan 11 2012, In : Journal of Hydrology. 414-415, 1 p.

Research output: Contribution to journalComment/debate

2 Scopus citations

Effects of capture by trammel net on Colorado river native Fishes

Hunt, T. A., Ward, D. L., Propper, C. R., Gibb, A. C., Hunt, T. A., Propper, C. R., Gibb, A. C. & Ward, D. L., Dec 1 2012, In : Journal of Fish and Wildlife Management. 3, 1, p. 133-141 9 p.

Research output: Contribution to journalComment/debate

1 Scopus citations

Genome sequence of "Candidatus Microthrix parvicella" Bio17-1, a long-chain-fatty-acid-accumulating filamentous actinobacterium from a biological wastewater treatment plant

Muller, E. E. L., Pinel, N., Gillece, J. D., Schupp, J. M., Price, L. B., Engelthaler, D. M., Levantesi, C., Tandoi, V., Luong, K., Baliga, N. S., Korlach, J., Keim, P. S. & Wilmes, P., Dec 1 2012, In : Journal of Bacteriology. 194, 23, p. 6670-6671 2 p.

Research output: Contribution to journalComment/debate

21 Scopus citations

The NSABB Recommendations: Rationale, Impact, and Implications

Keim, P. S., Jan 1 2012, In : mBio. 3, 1, p. 1-2 2 p.

Research output: Contribution to journalComment/debate

14 Scopus citations
2011

Differences in relative fitness among alternative mating tactics might be more apparent than real

Shuster, S. M., Sep 1 2011, In : Journal of Animal Ecology. 80, 5, p. 905-907 3 p.

Research output: Contribution to journalComment/debate

4 Scopus citations

The opportunity for sexual selection: Not mismeasured, just misunderstood

Krakauer, A. H., Webster, M. S., Duval, E. H., Jones, A. G. & Shuster, S. M., Sep 1 2011, In : Journal of Evolutionary Biology. 24, 9, p. 2064-2071 8 p.

Research output: Contribution to journalComment/debate

73 Scopus citations
2010

Bateman (1948): Pioneer in the measurement of sexual selection

Wade, M. J. & Shuster, S. M., Dec 1 2010, In : Heredity. 105, 6, p. 507-508 2 p.

Research output: Contribution to journalComment/debate

16 Scopus citations
2009

A response to: Limitations within "The limits to tree height"

Koch, G. W. & Sillett, S. C., Feb 1 2009, In : American Journal of Botany. 96, 2, p. 545-547 3 p.

Research output: Contribution to journalComment/debate

8 Scopus citations

Phylogenetic understanding of clonal populations in an era of whole genome sequencing

Pearson, T., Okinaka, R. T., Foster, J. T. & Keim, P., Sep 2009, In : Infection, Genetics and Evolution. 9, 5, p. 1010-1019 10 p.

Research output: Contribution to journalComment/debate

86 Scopus citations

Use of forensic methods under exigent circumstances without full validation

Schutzer, S. E., Keim, P., Czerwinski, K. & Budowle, B., Nov 25 2009, In : Science Translational Medicine. 1, 8, 8cm7.

Research output: Contribution to journalComment/debate

13 Scopus citations
2008

Erratum to Functional significance of intramandibular bending in Poeciliid fishes (Environmental Biology of Fishes DOI: 10.1007/s10641-008-9369-z)

Gibb, A., Ferry-Graham, L. A., Hernandez, L. P., Romasco, R. & Blanton, J., Dec 1 2008, In : Environmental Biology of Fishes. 83, 4, 1 p.

Research output: Contribution to journalComment/debate

2006

Anthrax, but not Bacillus anthracis?

Okinaka, R., Pearson, T. & Keim, P., Nov 1 2006, In : PLoS Pathogens. 2, 11, p. 1025-1027 3 p.

Research output: Contribution to journalComment/debate

26 Scopus citations

Erratum: Pathogenomic sequence analysis of Bacillus cereus and Bacillus thuringiensis isolates closely related to Bacillus anthracis (Journal of Bacteriology (2006) 188, 9 (3382-3390))

Han, C. S., Xie, G., Challacombe, J. F., Altherr, M. R., Bhotika, S. S., Brown, N., Bruce, D., Campbell, C. S., Campbell, M. L., Chen, J., Chertkov, O., Cleland, C., Dimitrijevic, M., Doggett, N. A., Fawcett, J. J., Glavina, T., Goodwin, L. A., Green, L. D., Hill, K. K., Hitchcock, P. & 28 others, Jackson, P. J., Keim, P., Kewalramani, A. R., Longmire, J., Lucas, S., Malfatti, S., McMurry, K., Meincke, L. J., Misra, M., Moseman, B. L., Mundt, M., Munk, A. C., Okinaka, R. T., Parson-Quintana, B., Reilly, L. P., Richardson, P., Robinson, D. L., Rubin, E., Saunders, E., Tapia, R., Tesmer, J. G., Thayer, N., Thompson, L. S., Tice, H., Ticknor, L. O., Wills, P. L., Brettin, T. S. & Gilna, P., Nov 1 2006, In : Journal of Bacteriology. 188, 21, 1 p.

Research output: Contribution to journalComment/debate

2002

Erratum: Characterization of the digestive tract of wild ayu (Fisheries Science (2002) 68 (341-346))

Nakagawa, H., Umino, T., Sekimoto, T., Ambas, I., Montgomery, W. L. & Nakano, T., Aug 1 2002, In : Fisheries Science. 68, 4, 1 p.

Research output: Contribution to journalComment/debate

2001

Erratum: "Contrasting effects of elevated CO2 on old and new soil carbon pools" (Soil Biology & Biochemistry (2001) 33:6 (365-373) PII: S0038071700001516)

Cardon, Z. G., Hungate, B. A., Cambardella, C. A., Chapin, F. S., Field, C. B., Holland, E. A. & Mooney, H. A., Jun 26 2001, In : Soil Biology and Biochemistry. 33, 7-8, 1 p.

Research output: Contribution to journalComment/debate

1 Scopus citations
2000

Erratum: Multiple-locus variable-number tandem repeat analysis reveals genetic relationships within Bacillus anthracis (Journal of Bacteriology (2000) 182:10 (2928-2936))

Keim, P., Price, L. B., Klevytska, A. M., Smith, K. L., Schupp, J. M., Okinaka, R., Jackson, P. J. & Hugh-Jones, M. E., Dec 1 2000, In : Journal of Bacteriology. 182, 23, 1 p.

Research output: Contribution to journalComment/debate

4 Scopus citations
1999

Re-analysis of genetic structure among populations of Rana pipiens in Arizona and Utah

Miller, M. P., Kimberling, D. N. & Keim, P., Dec 1999, In : Southwestern Naturalist. 44, 4, p. 527-530 4 p.

Research output: Contribution to journalComment/debate