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2020

Are Extreme Anatomical Modifications Required for Fish to Move Effectively on Land? Comparative Anatomy of the Posterior Axial Skeleton in the Cyprinodontiformes

Minicozzi, M., Kimball, D., Finden, A., Friedman, S. & Gibb, A. C., Jan 1 2020, In : Anatomical Record. 303, 1, p. 53-64 12 p.

Research output: Contribution to journalArticle

2 Scopus citations

Bee species checklist of the san francisco peaks, arizona

McCabe, L. M., Chesshire, P. R., Smith, D. R., Wolf, A., Gibbs, J., Griswold, T. L., Wright, K. W. & Cobb, N. S., Jan 1 2020, In : Biodiversity Data Journal. 8, p. 1-52 52 p.

Research output: Contribution to journalArticle

Open Access

Burkholderia ubonensis meropenem resistance: insights into distinct properties of class a β-lactamases in burkholderia cepacia complex and burkholderia pseudomallei complex bacteria

Somprasong, N., Hall, C. M., Webb, J. R., Sahl, J. W., Wagner, D. M., Keim, P., Currie, B. J. & Schweizer, H. P., Mar 1 2020, In : mBio. 11, 2, e00592-20.

Research output: Contribution to journalArticle

Open Access

Calcium-dependent titin–thin filament interactions in muscle: observations and theory

Nishikawa, K., Dutta, S., DuVall, M., Nelson, B., Gage, M. J. & Monroy, J. A., Mar 1 2020, In : Journal of Muscle Research and Cell Motility. 41, 1, p. 125-139 15 p.

Research output: Contribution to journalArticle

1 Scopus citations

Cell-free mitochondrial DNA increases in maternal circulation during healthy pregnancy: A prospective, longitudinal study

Cushen, S. C., Sprouse, M. L., Blessing, A., Sun, J., Jarvis, S. S., Okada, Y., Fu, Q., Romero, S. A., Phillips, N. R. & Goulopoulou, S., Feb 2020, In : American Journal of Physiology - Regulatory Integrative and Comparative Physiology. 318, 2, p. R445-R452

Research output: Contribution to journalArticle

Coyotes (Canis latrans) in Arizona, USA, exhibit immune and genetic evidence of rickettsial infections

Green, E. N., Porter, W. T., Howard, A. L., Yaglom, H., Benford, R., Busch, J. D. & Nieto, N. C., Apr 2020, In : Journal of wildlife diseases. 56, 2, p. 261-269 9 p.

Research output: Contribution to journalArticle

Draft whole-genome sequences of ciprofloxacin-resistant derivatives of a bacillus anthracis ΔANR strain lacking pXO1 and pXO2 plasmids

Biggs, T. D., Karavis, M. A., Harris, J. V., Hill, J. M., Bernhards, R. C., Price, L. B., Keim, P., Goodwin, B. G. & Sozhamannan, S., Apr 9 2020, In : Microbiology Resource Announcements. 9, 15, e00056-20.

Research output: Contribution to journalArticle

Open Access

Effects of a titin mutation on force enhancement and force depression in mouse soleus muscles

Tahir, U., Monroy, J. A., Rice, N. A. & Nishikawa, K. C., Jan 1 2020, In : Journal of Experimental Biology. 223, 2, jeb197038.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Environmental reservoir dynamics predict global infection patterns and population impacts for the fungal disease white-nose syndrome

Hoyt, J. R., Langwig, K. E., Sun, K., Parise, K. L., Li, A., Wang, Y., Huang, X., Worledge, L., Miller, H., White, J. P., Kaarakka, H. M., Redell, J. A., Görföl, T., Boldogh, S. A., Fukui, D., Sakuyama, M., Yachimori, S., Sato, A., Dalannast, M., Jargalsaikhan, A. & 8 others, Batbayar, N., Yovel, Y., Amichai, E., Natradze, I., Frick, W. F., Foster, J. T., Feng, J. & Kilpatrick, A. M., Mar 31 2020, In : Proceedings of the National Academy of Sciences of the United States of America. 117, 13, p. 7255-7262 8 p.

Research output: Contribution to journalArticle

Open Access

Familiar soil conditions help Pinus ponderosa seedlings cope with warming and drying climate

Remke, M. J., Hoang, T., Kolb, T., Gehring, C., Johnson, N. C. & Bowker, M. A., Jan 1 2020, (Accepted/In press) In : Restoration Ecology.

Research output: Contribution to journalArticle

Fire affects the taxonomic and functional composition of soil microbial communities, with cascading effects on grassland ecosystem functioning

Yang, S., Zheng, Q., Yang, Y., Yuan, M., Ma, X., Chiariello, N. R., Docherty, K. M., Field, C. B., Gutknecht, J. L. M., Hungate, B. A., Niboyet, A., Le Roux, X. & Zhou, J., Feb 1 2020, In : Global change biology. 26, 2, p. 431-442 12 p.

Research output: Contribution to journalArticle

Genomic Characterization of Newly Completed Genomes of Botulinum Neurotoxin-Producing Species from Argentina, Australia, and Africa

Smith, T. J., Xie, G., Williamson, C. H. D., Hill, K. K., Fernández, R. A., Sahl, J. W., Keim, P., Johnson, S. L. & Delaye, L., Mar 17 2020, In : Genome Biology and Evolution. 12, 3, p. 229-242 14 p.

Research output: Contribution to journalArticle

Open Access

Genomic characterization of Parengyodontium americanum sp. nov

Teixeira, M. D. M., Muszewska, A., Travis, J., Moreno, L. F., Ahmed, S., Roe, C., Mead, H., Steczkiewicz, K., Lemmer, D., de Hoog, S., Keim, P., Wiederhold, N. & Barker, B. M., May 2020, In : Fungal Genetics and Biology. 138, 103351.

Research output: Contribution to journalArticle

Global warming and shifts in cropping systems together reduce China's rice production

Chen, C., van Groenigen, K. J., Yang, H., Hungate, B. A., Yang, B., Tian, Y., Chen, J., Dong, W., Huang, S., Deng, A., Jiang, Y. & Zhang, W., Mar 2020, In : Global Food Security. 24, 100359.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Isolation and Molecular Characterization of Tick-Borne Relapsing Fever Borrelia Infecting Ornithodoros (Pavlovskyella) verrucosus Ticks Collected in Ukraine

Filatov, S., Krishnavajhala, A., Armstrong, B. A., Kneubehl, A. R., Nieto, N. C., De León, A. A. P. & Lopez, J. E., Feb 18 2020, In : Journal of Infectious Diseases. 221, 5, p. 804-811 8 p.

Research output: Contribution to journalArticle

Lower-than-expected CH4 emissions from rice paddies with rising CO2 concentrations

Qian, H., Huang, S., Chen, J., Wang, L., Hungate, B. A., van Kessel, C., Zhang, J., Deng, A., Jiang, Y., van Groenigen, K. J. & Zhang, W., Apr 1 2020, In : Global change biology. 26, 4, p. 2368-2376 9 p.

Research output: Contribution to journalArticle

Open Access

Mating type determination within a microsatellite multiplex for the fungal pathogen Pseudogymnoascus destructans, the causative agent of white-nose disease in bats

Dool, S., Altewischer, A., Fischer, N. M., Drees, K. P., Foster, J. T., Fritze, M. & Puechmaille, S. J., Mar 1 2020, In : Conservation Genetics Resources. 12, 1, p. 45-48 4 p.

Research output: Contribution to journalArticle

Megafauna decline have reduced pathogen dispersal which may have increased emergent infectious diseases

Doughty, C. E., Prys-Jones, T. O., Faurby, S., Abraham, A. J., Hepp, C., Leshyk, V., Fofanov, V. Y., Nieto, N. C., Svenning, J. C. & Galetti, M., Jan 1 2020, (Accepted/In press) In : Ecography.

Research output: Contribution to journalArticle

Open Access

Modelling multilocus selection in an individual-based, spatially-explicit landscape genetics framework

Landguth, E. L., Forester, B. R., Eckert, A. J., Shirk, A. J., Menon, M., Whipple, A., Day, C. C. & Cushman, S. A., Mar 1 2020, In : Molecular Ecology Resources. 20, 2, p. 605-615 11 p.

Research output: Contribution to journalArticle

Open Access

Non-structural carbohydrate dynamics associated with antecedent stem water potential and air temperature in a dominant desert shrub

Guo, J. S., Gear, L., Hultine, K. R., Koch, G. W. & Ogle, K., Jan 1 2020, (Accepted/In press) In : Plant Cell and Environment.

Research output: Contribution to journalArticle

Pathogen to commensal? Longitudinal within-host population dynamics, evolution, and adaptation during a chronic >16-year Burkholderia pseudomallei infection

Pearson, T., Sahl, J. W., Hepp, C. M., Handady, K., Hornstra, H., Vazquez, A. J., Settles, E., Mayo, M., Kaestli, M., Williamson, C. H. D., Price, E. P., Sarovich, D. S., Cook, J. M., Wolken, S. R., Bowen, R. A., Tuanyok, A., Foster, J. T., Drees, K. P., Kidd, T. J., Bell, S. C. & 2 others, Currie, B. J. & Keim, P., Jan 1 2020, In : PLoS Pathogens. 16, 3, e1008298.

Research output: Contribution to journalArticle

Open Access

Persistence of Brucella abortus lineages revealed by genomic characterization and phylodynamic analysis

Suárez-Esquivel, M., Hernández-Mora, G., Ruiz-Villalobos, N., Barquero-Calvo, E., Chacón-Díaz, C., Ladner, J. T., Oviedo-Sánchez, G., Foster, J. T., Rojas-Campos, N., Chaves-Olarte, E., Thomson, N. R., Moreno, E. & Guzmán-Verri, C., Apr 1 2020, In : PLoS neglected tropical diseases. 14, 4, p. e0008235

Research output: Contribution to journalArticle

Open Access

Protocol and Preliminary Results of the Nutritarian Women’s Health Study: A Longitudinal Effectiveness-Implementation Hybrid Study Assessing Dietary Intake and Health Outcomes

Sutliffe, J. T., Gardner, J. C., Wetzel, W. S., Carnot, M. J. & Adams, A. E. M., Jan 1 2020, (Accepted/In press) In : American Journal of Lifestyle Medicine.

Research output: Contribution to journalArticle

Responses to terrestrial nest predators by endemic and introduced Hawaiian birds

Cummins, G. C., Theimer, T. C. & Paxton, E. H., Jan 1 2020, (Accepted/In press) In : Ecology and Evolution.

Research output: Contribution to journalArticle

Open Access

Selective whole genome amplification and sequencing of Coxiella burnetii directly from environmental samples

Cocking, J. H., Deberg, M., Schupp, J., Sahl, J., Wiggins, K., Porty, A., Hornstra, H. M., Hepp, C., Jardine, C., Furstenau, T. N., Schulte-Hostedde, A., Fofanov, V. Y. & Pearson, T., Mar 2020, In : Genomics. 112, 2, p. 1872-1878 7 p.

Research output: Contribution to journalArticle

Soil carbon loss with warming: New evidence from carbon-degrading enzymes

Chen, J., Elsgaard, L., van Groenigen, K. J., Olesen, J. E., Liang, Z., Jiang, Y., Lærke, P. E., Zhang, Y., Luo, Y., Hungate, B. A., Sinsabaugh, R. L. & Jørgensen, U., Apr 1 2020, In : Global change biology. 26, 4, p. 1944-1952 9 p.

Research output: Contribution to journalArticle

Taxon-specific microbial growth and mortality patterns reveal distinct temporal population responses to rewetting in a California grassland soil

Blazewicz, S. J., Hungate, B. A., Koch, B. J., Nuccio, E. E., Morrissey, E., Brodie, E. L., Schwartz, E., Pett-Ridge, J. & Firestone, M. K., Jun 1 2020, In : ISME Journal. 14, 6, p. 1520-1532 13 p.

Research output: Contribution to journalArticle

1 Scopus citations

The soil priming effect: Consistent across ecosystems, elusive mechanisms

Liu, X. J. A., Finley, B. K., Mau, R. L., Schwartz, E., Dijkstra, P., Bowker, M. A. & Hungate, B. A., Jan 2020, In : Soil Biology and Biochemistry. 140, 107617.

Research output: Contribution to journalArticle

1 Scopus citations
2019

A global to local genomics analysis of clostridioides difficile ST1/RT027 identifies cryptic transmission events in a northern Arizona healthcare network

Williamson, C. H. D., Stone, N. E., Nunnally, A. E., Hornstra, H. M., Wagner, D. M., Roe, C. C., Vazquez, A. J., Nandurkar, N., Vinocur, J., Terriquez, J., Gillece, J., Travis, J., Lemmer, D., Keim, P. & Sahl, J. W., Jul 2019, In : Microbial Genomics. 5, 7, 000271.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Alternative mating tactics in socially monogamous prairie voles, Microtus ochrogaster

Shuster, S. M., Willen, R. M., Keane, B. & Solomon, N. G., Jan 1 2019, In : Frontiers in Ecology and Evolution. 7, FEB, 007.

Research output: Contribution to journalArticle

Open Access
4 Scopus citations

A single introduction of Yersinia pestis to Brazil during the 3rd plague pandemic

Vogler, A. J., Sahl, J. W., Leal, N. C., Sobreira, M., Williamson, C. H. D., Bollig, M. C., Birdsell, D. N., Rivera, A., Thompson, B., Nottingham, R., Rezende, A. M., Keim, P. S., Almeida, A. M. P. & Wagner, D. M., Jan 1 2019, In : PLoS One. 14, 1, e0209478.

Research output: Contribution to journalArticle

Assessment of North American arthropod collections: Prospects and challenges for addressing biodiversity research

Cobb, N. S., Gall, L. F., Zaspel, J. M., Dowdy, N. J., McCabe, L. M. & Kawahara, A. Y., Jan 1 2019, In : PeerJ. 2019, 11, e8086.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Axial variation of xylem conduits in the Earth’s tallest trees

Williams, C. B., Anfodillo, T., Crivellaro, A., Lazzarin, M., Dawson, T. E. & Koch, G. W., Jan 1 2019, In : Trees - Structure and Function.

Research output: Contribution to journalArticle

Bioclimatic envelopes for individual demographic events driven by extremes: Plant mortality from drought and warming

Law, D. J., Adams, H. D., Breshears, D. D., Cobb, N. S., Bradford, J. B., Zou, C. B., Field, J. P., Gardea, A. A., Williams, A. P. & Huxman, T. E., Jan 1 2019, In : International Journal of Plant Sciences. 180, 1, p. 53-62 10 p.

Research output: Contribution to journalArticle

7 Scopus citations

Burkholderia pseudomallei, the causative agent of melioidosis, is rare but ecologically established and widely dispersed in the environment in Puerto Rico

Hall, C. M., Jaramillo, S., Jimenez, R., Stone, N. E., Centner, H., Busch, J. D., Bratsch, N., Roe, C. C., Gee, J. E., Hoffmaster, A. R., Rivera-Garcia, S., Soltero, F., Ryff, K., Perez-Padilla, J., Keim, P., Sahl, J. W. & Wagner, D. M., Jan 1 2019, In : PLoS neglected tropical diseases. 13, 9, e0007727.

Research output: Contribution to journalArticle

Open Access
3 Scopus citations

Caprine humoral response to burkholderia pseudomallei antigens during acute melioidosis from aerosol exposure

Yi, J., Simpanya, M. F., Settles, E. W., Shannon, A. B., Hernandez, K., Pristo, L., Keener, M. E., Hornstra, H., Busch, J. D., Soffler, C., Brett, P. J., Currie, B. J., Bowen, R. A., Tuanyok, A. & Keim, P. S., Feb 1 2019, In : PLoS Neglected Tropical Diseases. 13, 2, e0006851.

Research output: Contribution to journalArticle

Open Access

Citizen science informs human-tick exposure in the Northeastern United States

Porter, W. T., Motyka, P. J., Wachara, J., Barrand, Z. A., Hmood, Z., McLaughlin, M., Pemberton, K. & Nieto, N. C., May 7 2019, In : International Journal of Health Geographics. 18, 1, 9.

Research output: Contribution to journalArticle

Open Access
4 Scopus citations

Clarifying the interpretation of carbon use efficiency in soil through methods comparison

Geyer, K. M., Dijkstra, P., Sinsabaugh, R. & Frey, S. D., Jan 1 2019, In : Soil Biology and Biochemistry. 128, p. 79-88 10 p.

Research output: Contribution to journalArticle

19 Scopus citations

Climate-driven reduction of genetic variation in plant phenology alters soil communities and nutrient pools

Ware, I. M., Van Nuland, M. E., Schweitzer, J. A., Yang, Z., Schadt, C. W., Sidak-Loftis, L. C., Stone, N. E., Busch, J. D., Wagner, D. M. & Bailey, J. K., Jan 1 2019, (Accepted/In press) In : Global Change Biology.

Research output: Contribution to journalArticle

4 Scopus citations

Common garden experiments disentangle plant genetic and environmental contributions to ectomycorrhizal fungal community structure

Patterson, A., Flores-Rentería, L., Whipple, A., Whitham, T. & Gehring, C., Jan 2019, In : New Phytologist. 221, 1, p. 493-502 10 p.

Research output: Contribution to journalArticle

5 Scopus citations

Computationally optimizing the compliance of multilayered biomimetic tissue engineered vascular grafts

Tamimi, E. A., Ardila, D. C., Ensley, B. D., Kellar, R. S. & Vande Geest, J. P., Jun 1 2019, In : Journal of Biomechanical Engineering. 141, 6, 061003.

Research output: Contribution to journalArticle

1 Scopus citations

Decadal biomass increment in early secondary succession woody ecosystems is increased by CO 2 enrichment

Walker, A. P., De Kauwe, M. G., Medlyn, B. E., Zaehle, S., Iversen, C. M., Asao, S., Guenet, B., Harper, A., Hickler, T., Hungate, B. A., Jain, A. K., Luo, Y., Lu, X., Lu, M., Luus, K., Megonigal, J. P., Oren, R., Ryan, E., Shu, S., Talhelm, A. & 7 others, Wang, Y. P., Warren, J. M., Werner, C., Xia, J., Yang, B., Zak, D. R. & Norby, R. J., Dec 1 2019, In : Nature Communications. 10, 1, 454.

Research output: Contribution to journalArticle

Open Access
9 Scopus citations

Detection of Pseudogymnoascus destructans on Wisconsin Bats During Summer

Huebschman, J. J., Hoerner, S. A., White, J. P., Kaarakka, H. M., Parise, K. L. & Foster, J. T., Jul 1 2019, In : Journal of wildlife diseases. 55, 3, p. 673-677 5 p.

Research output: Contribution to journalArticle

2 Scopus citations

Direct detection of Coccidioides from Arizona soils using CocciENV, a highly sensitive and specific real-time PCR assay

Bowers, J. R., Parise, K. L., Kelley, E. J., Lemmer, D., Schupp, J. M., Driebe, E. M., Engelthaler, D. M., Keim, P. S. & Barker, B. M., Feb 1 2019, In : Medical Mycology. 57, 2, p. 246-255 10 p.

Research output: Contribution to journalArticle

8 Scopus citations

Ecosystem hero and villain: Native frog consumes rice pests, while the invasive cane toad feasts on beneficial arthropods

Shuman-Goodier, M. E., Diaz, M. I., Almazan, M. L., Singleton, G. R., Hadi, B. A. R. & Propper, C. R., Jul 1 2019, In : Agriculture, Ecosystems and Environment. 279, p. 100-108 9 p.

Research output: Contribution to journalArticle

Effects of ursodeoxycholic acid on the gut microbiome and colorectal adenoma development

Pearson, T., Caporaso, J. G., Yellowhair, M., Bokulich, N. A., Padi, M., Roe, D. J., Wertheim, B. C., Linhart, M., Martinez, J. A., Bilagody, C., Hornstra, H., Alberts, D. S., Lance, P. & Thompson, P. A., Feb 1 2019, In : Cancer Medicine. 8, 2, p. 617-628 12 p.

Research output: Contribution to journalArticle

Open Access
5 Scopus citations

Environmental filtering of body size and darker coloration in pollinator communities indicate thermal restrictions on bees, but not flies, at high elevations

McCabe, L. M., Cobb, N. S. & Butterfield, B. J., Jan 1 2019, In : PeerJ. 2019, 10, e7867.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations