Research output per year
Research output per year
Search results
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2021
Adaptive evolution in a conifer hybrid zone is driven by a mosaic of recently introgressed and background genetic variants
Menon, M., Bagley, J. C., Page, G. F. M., Whipple, A. V., Schoettle, A. W., Still, C. J., Wehenkel, C., Waring, K. M., Flores-Renteria, L., Cushman, S. A. & Eckert, A. J., Dec 2021, In: Communications biology. 4, 1, 160.Research output: Contribution to journal › Article › peer-review
Open Access -
Adaptive trait syndromes along multiple economic spectra define cold and warm adapted ecotypes in a widely distributed foundation tree species
Blasini, D. E., Koepke, D. F., Grady, K. C., Allan, G. J., Gehring, C. A., Whitham, T. G., Cushman, S. A. & Hultine, K. R., Mar 2021, In: Journal of Ecology. 109, 3, p. 1298-1318 21 p.Research output: Contribution to journal › Article › peer-review
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A method for experimental warming of developing tree seeds with a common garden demonstration of seedling responses
Moler, E. R. V., Page, G., Flores-Rentería, L., Garms, C. G., Hull, J. B., Cooper, H. F., Swenson, J., Perks, S., Waring, K. M. & Whipple, A. V., Dec 2021, In: Plant Methods. 17, 1, 1.Research output: Contribution to journal › Article › peer-review
Open Access -
A trade-off between plant and soil carbon storage under elevated CO2
Terrer, C., Phillips, R. P., Hungate, B. A., Rosende, J., Pett-Ridge, J., Craig, M. E., van Groenigen, K. J., Keenan, T. F., Sulman, B. N., Stocker, B. D., Reich, P. B., Pellegrini, A. F. A., Pendall, E., Zhang, H., Evans, R. D., Carrillo, Y., Fisher, J. B., Van Sundert, K., Vicca, S. & Jackson, R. B., Mar 25 2021, In: Nature. 591, 7851, p. 599-603 5 p.Research output: Contribution to journal › Article › peer-review
2 Scopus citations -
Burkholderia pseudomallei OMVs derived from infection mimicking conditions elicit similar protection to a live-attenuated vaccine
Baker, S. M., Settles, E. W., Davitt, C., Gellings, P., Kikendall, N., Hoffmann, J., Wang, Y., Bitoun, J., Lodrigue, K. R., Sahl, J. W., Keim, P., Roy, C., McLachlan, J. & Morici, L. A., Dec 2021, In: npj Vaccines. 6, 1, 18.Research output: Contribution to journal › Article › peer-review
Open Access3 Scopus citations -
Burkholderia ubonensis high-level tetracycline resistance is due to efflux pump synergy involving a novel teta(64) resistance determinant
Somprasong, N., Hall, C. M., Webb, J. R., Sahl, J. W., Wagner, D. M., Keim, P., Currie, B. J. & Schweizer, H. P., Mar 2021, In: Antimicrobial Agents and Chemotherapy. 65, 3, e01767-20.Research output: Contribution to journal › Article › peer-review
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Canine brucellosis in Costa Rica reveals widespread Brucella canis infection and the recent introduction of foreign strains
Suárez-Esquivel, M., Ruiz-Villalobos, N., Hidalgo-Jara, W., Chacón-Díaz, C., Zúñiga-Pereira, A. M., Masís-Mora, M., Fernández-Fernández, E., Hernández-Mora, G., Barquero-Calvo, E., Chaves-Olarte, E., Thomson, N. R., Foster, J. T., Moreno, E. & Guzmán-Verri, C., Jun 2021, In: Veterinary Microbiology. 257, 109072.Research output: Contribution to journal › Article › peer-review
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Complete genome sequence of peptacetobacter (Clostridium) hiranonis Strain DGF055142, isolated from dog feces from Flagstaff, Arizona, USA, 2019
Stone, N. E., Nunnally, A. E., Roe, C. C., Hornstra, H. M., Wagner, D. M. & Sahl, J. W., Mar 4 2021, In: Microbiology Resource Announcements. 10, 9, e00067-21.Research output: Contribution to journal › Article › peer-review
Open Access -
Comprehensive estimation of spatial and temporal migratory connectivity across the annual cycle to direct conservation efforts
Knight, E. C., Harrison, A. L., Scarpignato, A. L., Van Wilgenburg, S. L., Bayne, E. M., Ng, J. W., Angell, E., Bowman, R., Brigham, R. M., Drolet, B., Easton, W. E., Forrester, T. R., Foster, J. T., Haché, S., Hannah, K. C., Hick, K. G., Ibarzabal, J., Imlay, T. L., Mackenzie, S. A., Marsh, A. & 9 others, , May 2021, In: Ecography. 44, 5, p. 665-679 15 p.Research output: Contribution to journal › Article › peer-review
Open Access3 Scopus citations -
Connectivity: insights from the U.S. Long Term Ecological Research Network
Iwaniec, D. M., Gooseff, M., Suding, K. N., Samuel Johnson, D., Reed, D. C., Peters, D. P. C., Adams, B., Barrett, J. E., Bestelmeyer, B. T., Castorani, M. C. N., Cook, E. M., Davidson, M. J., Groffman, P. M., Hanan, N. P., Huenneke, L. F., Johnson, P. T. J., McKnight, D. M., Miller, R. J., Okin, G. S., Preston, D. L. & 7 others, , May 2021, In: Ecosphere. 12, 5, e03432.Research output: Contribution to journal › Article › peer-review
Open Access -
Continent-wide tree fecundity driven by indirect climate effects
Clark, J. S., Andrus, R., Aubry-Kientz, M., Bergeron, Y., Bogdziewicz, M., Bragg, D. C., Brockway, D., Cleavitt, N. L., Cohen, S., Courbaud, B., Daley, R., Das, A. J., Dietze, M., Fahey, T. J., Fer, I., Franklin, J. F., Gehring, C. A., Gilbert, G. S., Greenberg, C. H., Guo, Q. & 43 others, , Dec 2021, In: Nature Communications. 12, 1, 1242.Research output: Contribution to journal › Article › peer-review
Open Access3 Scopus citations -
Daily forecasting of regional epidemics of coronavirus disease with bayesian uncertainty quantification, United States
Lin, Y. T., Neumann, J., Miller, E. F., Posner, R. G., Mallela, A., Safta, C., Ray, J., Thakur, G., Chinthavali, S. & Hlavacek, W. S., Mar 2021, In: Emerging infectious diseases. 27, 3, p. 767-778 12 p.Research output: Contribution to journal › Article › peer-review
Open Access1 Scopus citations -
Developmental assays using invasive cane toads, Rhinella marina, reveal safety concerns of a common formulation of the rice herbicide, butachlor
Shuman-Goodier, M. E., Singleton, G. R., Forsman, A. M., Hines, S., Christodoulides, N., Daniels, K. D. & Propper, C. R., Mar 1 2021, In: Environmental Pollution. 272, 115955.Research output: Contribution to journal › Article › peer-review
1 Scopus citations -
Ectomycorrhizal fungal communities differ among parental and hybrid Populus cross types within a natural riparian habitat
Lamit, L. J., Meinhardt, K. A., Flores-Rentería, L., Kovacs, Z. I., Zinkgraf, M., Whitham, T. G. & Gehring, C. A., Aug 2021, In: Fungal Ecology. 52, 101059.Research output: Contribution to journal › Article › peer-review
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Equids engineer desert water availability
Lundgren, E. J., Ramp, D., Stromberg, J. C., Wu, J., Nieto, N. C., Sluk, M., Moeller, K. T. & Wallach, A. D., Apr 30 2021, In: Science. 372, 6541, p. 491-495 5 p.Research output: Contribution to journal › Article › peer-review
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First Case of Brucellosis Caused by an Amphibian-type Brucella
Rouzic, N., Desmier, L., Cariou, M. E., Gay, E., Foster, J. T., Williamson, C. H. D., Schmitt, F., Le Henaff, M., Le Coz, A., Lorléac'h, A., Lavigne, J. P., O'Callaghan, D. & Keriel, A., May 4 2021, In: Clinical Infectious Diseases. 72, 9, p. e404-e407Research output: Contribution to journal › Article › peer-review
5 Scopus citations -
From Bees to Flies: Global Shift in Pollinator Communities Along Elevation Gradients
McCabe, L. M. & Cobb, N. S., Jan 15 2021, In: Frontiers in Ecology and Evolution. 8, 626124.Research output: Contribution to journal › Article › peer-review
Open Access -
Genetic data improves niche model discrimination and alters the direction and magnitude of climate change forecasts
Bothwell, H. M., Evans, L. M., Hersch-Green, E. I., Woolbright, S. A., Allan, G. J. & Whitham, T. G., Apr 2021, In: Ecological Applications. 31, 3, e02254.Research output: Contribution to journal › Article › peer-review
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Genetic structure and population history in two critically endangered Kaua‘i honeycreepers
Cassin-Sackett, L., Campana, M. G., McInerney, N. R., Lim, H. C., Przelomska, N. A. S., Masuda, B., Chesser, R. T., Paxton, E. H., Foster, J. T., Crampton, L. H. & Fleischer, R. C., Aug 2021, In: Conservation Genetics. 22, 4, p. 601-614 14 p.Research output: Contribution to journal › Article › peer-review
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Genome sequences of community carriage strains of staphylococcus aureus from Yuma, Arizona
Pearson, T., Hepp, C., Trotter, R. T., Mbegbu, M., Russakoff, B., Yagüe, D. P., Wood, C., Tucker-Morgan, K., Ceniceros, K., Padilla, C., Kyman, S. & Villa, F., Sep 2021, In: Microbiology Resource Announcements. 10, 37 September, e00449-21.Research output: Contribution to journal › Article › peer-review
Open Access -
Genomics, Exometabolomics, and Metabolic Probing Reveal Conserved Proteolytic Metabolism of Thermoflexus hugenholtzii and Three Candidate Species From China and Japan
Thomas, S. C., Payne, D., Tamadonfar, K. O., Seymour, C. O., Jiao, J. Y., Murugapiran, S. K., Lai, D., Lau, R., Bowen, B. P., Silva, L. P., Louie, K. B., Huntemann, M., Clum, A., Spunde, A., Pillay, M., Palaniappan, K., Varghese, N., Mikhailova, N., Chen, I. M., Stamatis, D. & 14 others, , May 3 2021, In: Frontiers in Microbiology. 12, 632731.Research output: Contribution to journal › Article › peer-review
Open Access -
Genomics-informed insights into microbial degradation of N,N-dimethylformamide
Li, J., Dijkstra, P., Lu, Q., Wang, S., Chen, S., Li, D., Wang, Z., Jia, Z., Wang, L. & Shim, H., Sep 2021, In: International Biodeterioration and Biodegradation. 163, 105283.Research output: Contribution to journal › Article › peer-review
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Herd immunity drives the epidemic fadeout of avian cholera in Arctic-nesting seabirds
van Dijk, J. G. B., Iverson, S. A., Gilchrist, H. G., Harms, N. J., Hennin, H. L., Love, O. P., Buttler, E. I., Lesceu, S., Foster, J. T., Forbes, M. R. & Soos, C., Dec 2021, In: Scientific Reports. 11, 1, 1046.Research output: Contribution to journal › Article › peer-review
Open Access -
Heterozygous trees rebound the fastest after felling by beavers to positively affect arthropod community diversity
Walker, F. M., Durben, R., Shuster, S. M., Lindroth, R. L. & Whitham, T. G., Jun 2021, In: Forests. 12, 6, 694.Research output: Contribution to journal › Article › peer-review
Open Access -
High intensity muscle stimulation activates a systemic Nrf2-mediated redox stress response
Ostrom, E. L., Valencia, A. P., Marcinek, D. J. & Traustadóttir, T., Aug 20 2021, In: Free Radical Biology and Medicine. 172, p. 82-89 8 p.Research output: Contribution to journal › Article › peer-review
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Hiking Trails Increase Abundance of Harvester Ant1Nests at Clear Creek, Arizona
Uhey, D. A., Cummins, G. C., Rotter, M. C., Lassiter, L. S. & Whitham, T. G., Jun 29 2021, In: Southwestern Entomologist. 46, 2, p. 403-412 10 p.Research output: Contribution to journal › Article › peer-review
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How close are we to the temperature tipping point of the terrestrial biosphere?
Duffy, K. A., Schwalm, C. R., Arcus, V. L., Koch, G. W., Liang, L. L. & Schipper, L. A., Jan 13 2021, In: Science Advances. 7, 3, eaay1052.Research output: Contribution to journal › Article › peer-review
Open Access3 Scopus citations -
Impact of Different Exercise Modalities on the Human Gut Microbiome
Bycura, D., Santos, A. C., Shiffer, A., Kyman, S., Winfree, K., Sutliffe, J., Pearson, T., Sonderegger, D., Cope, E. & Caporaso, J. G., Feb 2021, In: Sports. 9, 2, p. 1-22 22 p.Research output: Contribution to journal › Article › peer-review
Open Access1 Scopus citations -
Integration of choline geranate into electrospun protein scaffolds affords antimicrobial activity to biomaterials used for cutaneous wound healing
Bardsley, T. A., Evans, C. L., Greene, J. R., Audet, R., Harrison, M. J., Zimmerman, M., Nieto, N. C., Del Sesto, R. E., Koppisch, A. T. & Kellar, R. S., Sep 2021, In: Journal of Biomedical Materials Research - Part B Applied Biomaterials. 109, 9, p. 1271-1282 12 p.Research output: Contribution to journal › Article › peer-review
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Leptospira in river and soil in a highly endemic area of Ecuador
Miller, E., Barragan, V., Chiriboga, J., Weddell, C., Luna, L., Jiménez, D. J., Aleman, J., Mihaljevic, J. R., Olivas, S., Marks, J., Izurieta, R., Nieto, N., Keim, P., Trueba, G., Caporaso, J. G. & Pearson, T., Dec 2021, In: BMC microbiology. 21, 1, 17.Research output: Contribution to journal › Article › peer-review
Open Access -
Long-Term Survival of Virulent Tularemia Pathogens outside a Host in Conditions That Mimic Natural Aquatic Environments
Golovliov, I., Bäckman, S., Granberg, M., Salomonsson, E., Lundmark, E., Näslund, J., Busch, J. D., Birdsell, D., Sahl, J. W., Wagner, D. M., Johansson, A., Forsman, M. & Thelaus, J., Mar 2021, In: Applied and Environmental Microbiology. 87, 6, p. 1-11 11 p., e02713-20.Research output: Contribution to journal › Article › peer-review
Open Access -
Long-term warming in a Mediterranean-type grassland affects soil bacterial functional potential but not bacterial taxonomic composition
Gao, Y., Ding, J., Yuan, M., Chiariello, N., Docherty, K., Field, C., Gao, Q., Gu, B., Gutknecht, J., Hungate, B. A., Le Roux, X., Niboyet, A., Qi, Q., Shi, Z., Zhou, J. & Yang, Y., Dec 2021, In: npj Biofilms and Microbiomes. 7, 1, 17.Research output: Contribution to journal › Article › peer-review
Open Access -
Lord of the Diptera (and Moths and a Spider): Molecular Diet Analyses and Foraging Ecology of Indiana Bats in Illinois
O'Rourke, D. R., Mangan, M. T., Mangan, K. E., Bokulich, N. A., MacManes, M. D. & Foster, J. T., Feb 16 2021, In: Frontiers in Ecology and Evolution. 9, 623655.Research output: Contribution to journal › Article › peer-review
Open Access1 Scopus citations -
Mechanistic insights into the success of xenobiotic degraders resolved from metagenomes of microbial enrichment cultures
Li, J., Jia, C., Lu, Q., Hungate, B. A., Dijkstra, P., Wang, S., Wu, C., Chen, S., Li, D. & Shim, H., Sep 15 2021, In: Journal of Hazardous Materials. 418, 126384.Research output: Contribution to journal › Article › peer-review
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Microbes on decomposing litter in streams: entering on the leaf or colonizing in the water?
Hayer, M., Wymore, A. S., Hungate, B. A., Schwartz, E., Koch, B. J. & Marks, J. C., 2021, (Accepted/In press) In: ISME Journal.Research output: Contribution to journal › Article › peer-review
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Mobility and infectiousness in the spatial spread of an emerging fungal pathogen
Langwig, K. E., White, J. P., Parise, K. L., Kaarakka, H. M., Redell, J. A., DePue, J. E., Scullon, W. H., Foster, J. T., Kilpatrick, A. M. & Hoyt, J. R., May 2021, In: Journal of Animal Ecology. 90, 5, p. 1134-1141 8 p.Research output: Contribution to journal › Article › peer-review
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Net-spinning caddisfly distribution in large regulated rivers
Metcalfe, A. N., Muehlbauer, J. D., Kennedy, T. A., Yackulic, C. B., Dibble, K. L. & Marks, J. C., Jan 2021, In: Freshwater Biology. 66, 1, p. 89-101 13 p.Research output: Contribution to journal › Article › peer-review
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No evidence for enzootic plague within black-tailed prairie dog (Cynomys ludovicianus) populations
Colman, R. E., Brinkerhoff, R. J., Busch, J. D., Ray, C., Doyle, A., Sahl, J. W., Keim, P., Collinge, S. K. & Wagner, D. M., 2021, (Accepted/In press) In: Integrative Zoology.Research output: Contribution to journal › Article › peer-review
Open Access -
Non-cross Bridge Viscoelastic Elements Contribute to Muscle Force and Work During Stretch-Shortening Cycles: Evidence From Whole Muscles and Permeabilized Fibers
Hessel, A. L., Monroy, J. A. & Nishikawa, K. C., Mar 29 2021, In: Frontiers in Physiology. 12, 648019.Research output: Contribution to journal › Article › peer-review
Open Access -
Nutrients cause consolidation of soil carbon flux to small proportion of bacterial community
Stone, B. W., Li, J., Koch, B. J., Blazewicz, S. J., Dijkstra, P., Hayer, M., Hofmockel, K. S., Liu, X. J. A., Mau, R. L., Morrissey, E. M., Pett-Ridge, J., Schwartz, E. & Hungate, B. A., Dec 2021, In: Nature Communications. 12, 1, 3381.Research output: Contribution to journal › Article › peer-review
Open Access -
Predicting the current and future distribution of the western black-legged tick, Ixodes pacificus, across the Western US using citizen science collections
Tanner Porter, W., Barrand, Z. A., Wachara, J., DaVall, K., Mihaljevic, J. R., Pearson, T., Salkeld, D. J. & Nieto, N. C., Jan 2021, In: PLoS ONE. 16, 1 January, e0244754.Research output: Contribution to journal › Article › peer-review
Open Access -
Protocol and Preliminary Results of the Nutritarian Women’s Health Study: A Longitudinal Effectiveness-Implementation Hybrid Study Assessing Dietary Intake and Health Outcomes
Sutliffe, J. T., Gardner, J. C., Wetzel, W. S., Carnot, M. J. & Adams, A. E. M., Jul 2021, In: American Journal of Lifestyle Medicine. 15, 4, p. 453-465 13 p.Research output: Contribution to journal › Article › peer-review
1 Scopus citations -
Rainfall continentality, via the winter Gams angle, provides a new dimension to biogeographical distributions in the western United States
Michalet, R., Choler, P., Callaway, R. M. & Whitham, T. G., Feb 2021, In: Global Ecology and Biogeography. 30, 2, p. 384-397 14 p.Research output: Contribution to journal › Article › peer-review
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Rapid response of nitrogen cycling gene transcription to labile carbon amendments in a soil microbial community
Chuckran, P. F., Fofanov, V., Hungate, B. A., Morrissey, E. M., Schwartz, E., Walkup, J. & Dijkstra, P., May 2021, In: mSystems. 6, 3, e00161.Research output: Contribution to journal › Article › peer-review
Open Access -
Reorganized genomic taxonomy of francisellaceae enables design of robust environmental PCR assays for detection of francisella tularensis
Öhrman, C., Sahl, J. W., Sjödin, A., Uneklint, I., Ballard, R., Karlsson, L., McDonough, R. F., Sundell, D., Soria, K., Bäckman, S., Chase, K., Brindefalk, B., Sozhamannan, S., Vallesi, A., Hägglund, E., Ramirez-Paredes, J. G., Thelaus, J., Colquhoun, D., Myrtennäs, K., Birdsell, D. & 3 others, , Jan 2021, In: Microorganisms. 9, 1, p. 1-21 21 p., 146.Research output: Contribution to journal › Article › peer-review
Open Access -
Riverine complexity and life history inform restoration in riparian environments in the southwestern United States
Palmquist, E. C., Allan, G. J., Ogle, K., Whitham, T. G., Butterfield, B. J. & Shafroth, P. B., 2021, (Accepted/In press) In: Restoration Ecology.Research output: Contribution to journal › Article › peer-review
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Roles of bacteriophages, plasmids and CRISPR immunity in microbial community dynamics revealed using time-series integrated meta-omics
Martínez Arbas, S., Narayanasamy, S., Herold, M., Lebrun, L. A., Hoopmann, M. R., Li, S., Lam, T. J., Kunath, B. J., Hicks, N. D., Liu, C. M., Price, L. B., Laczny, C. C., Gillece, J. D., Schupp, J. M., Keim, P. S., Moritz, R. L., Faust, K., Tang, H., Ye, Y., Skupin, A. & 3 others, , Jan 2021, In: Nature Microbiology. 6, 1, p. 123-135 13 p.Research output: Contribution to journal › Article › peer-review
Open Access2 Scopus citations -
SaQuant: a real-time PCR assay for quantitative assessment of Staphylococcus aureus
Wood, C., Sahl, J., Maltinsky, S., Coyne, B., Russakoff, B., Yagüe, D. P., Bowers, J. & Pearson, T., Dec 2021, In: BMC microbiology. 21, 1, 174.Research output: Contribution to journal › Article › peer-review
Open Access -
Stenoparib, an inhibitor of cellular poly(Adp-ribose) polymerase, blocks replication of the sars-cov-2 and hcov-nl63 human coronaviruses in vitro
Stone, N. E., Jaramillo, S. A., Jones, A. N., Vazquez, A. J., Martz, M., Versluis, L. M., Raniere, M. O., Nunnally, H. E., Zarn, K. E., Nottingham, R., Ng, K. R., Sahl, J. W., Wagner, D. M., Knudsen, S., Settles, E. W., Keim, P. & French, C. T., 2021, In: mBio. 12, 1, p. 1-12 12 p., e03495-20.Research output: Contribution to journal › Article › peer-review
Open Access -
Strength and power capabilities predict weighted parameter ranking of saut de chat leaping performance in dancers
Rice, P. E., Nishikawa, K. & Nimphius, S., 2021, (Accepted/In press) In: Sports Biomechanics.Research output: Contribution to journal › Article › peer-review