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2019

A Step-by-Step Guide to Using BioNetFit

Hlavacek, W. S., Csicsery-Ronay, J. A., Baker, L. R., Ramos Álamo, M. D. C., Ionkov, A., Mitra, E. D., Suderman, R., Erickson, K. E., Dias, R., Colvin, J., Thomas, B. R. & Posner, R. G., Jan 1 2019, Methods in Molecular Biology. Humana Press Inc., p. 391-419 29 p. (Methods in Molecular Biology; vol. 1945).

Research output: Chapter in Book/Report/Conference proceedingChapter

1 Scopus citations

Microbial Taxon-Specific Isotope Incorporation with DNA Quantitative Stable Isotope Probing

Finley, B. K., Hayer, M., Mau, R. L., Purcell, A. M., Koch, B. J., van Gestel, N. C., Schwartz, E. & Hungate, B. A., Jan 1 2019, Methods in Molecular Biology. Humana Press Inc., p. 137-149 13 p. (Methods in Molecular Biology; vol. 2046).

Research output: Chapter in Book/Report/Conference proceedingChapter

Rapid broad-scale ecosystem changes and their consequences for biodiversity

Breshears, D. D., Field, J. P., Law, D. J., Villegas, J. C., Allen, C. D., Cobb, N. S. & Bradford, J. B., Jan 1 2019, Biodiversity and Climate Change: Transforming the Biosphere. Yale University Press, p. 80-90 11 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Stable Isotope Probing of Microorganisms in Environmental Samples with H218O

Schwartz, E., Hayer, M., Hungate, B. A. & Mau, R. L., Jan 1 2019, Methods in Molecular Biology. Humana Press Inc., p. 129-136 8 p. (Methods in Molecular Biology; vol. 2046).

Research output: Chapter in Book/Report/Conference proceedingChapter

2018

Ecophysiology

Ferry-Graham, L. A. & Gibb, A. C., Jan 1 2018, Encyclopedia of Ecology. Elsevier, p. 346-349 4 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Mating systems

Shuster, S. M., Jan 1 2018, Encyclopedia of Ecology. Elsevier, p. 274-283 10 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2017

6.14 Cardiovascular tissue engineering

Tabor, A. J., Kellar, R. S., Lancaster, J. J., Goldman, S., McAllister, T. N. & L’Heureux, N., Jan 1 2017, Comprehensive Biomaterials II. Elsevier, p. 236-255 20 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Adding pieces to the puzzle: Assessing the geographic distribution of coxiella burnetii in dairy cattle and goats from the state of indiana (USA)

Bauer, A. E., Olivas, S., Hornstra, H. & Pearson, T., Jan 1 2017, The Principles and Practice of Q Fever: The One Health Paradigm. Nova Science Publishers, Inc., p. 351-358 8 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Insect herbivore population dynamics on trees and shrubs: New approaches relevant to latent and eruptive species and life table development

Price, P. W., Cobb, N. S., Craig, T. P., Fernandes, G. W., Itami, J. K., Mopper, S. & Preszler, R. W., Jan 1 2017, Insect-Plant Interactions. CRC Press, Vol. 2. p. 1-38 38 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

7 Scopus citations

Introduction: Mycorrhizas and Soil Structure, Moisture, and Salinity

Gehring, C. A., Jan 1 2017, Mycorrhizal Mediation of Soil: Fertility, Structure, and Carbon Storage. Elsevier Inc., p. 235-240 6 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

1 Scopus citations

Mycorrhizas, Drought, and Host-Plant Mortality

Gehring, C. A., Swaty, R. L. & Deckert, R. J., Jan 1 2017, Mycorrhizal Mediation of Soil: Fertility, Structure, and Carbon Storage. Elsevier Inc., p. 279-298 20 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

5 Scopus citations

The impact of plant stress on herbivore population dynamics

Waring, G. L. & Cobb, N. S., Jan 1 2017, Insect-Plant Interactions. CRC Press, Vol. 4. p. 167-226 60 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

32 Scopus citations
2016

Cerrado to rupestrian grasslands: Patterns of species distribution and the forces shaping them along an altitudinal gradient

Fernandes, G. W., Almeida, H. A., Nunes, C. A., Xavier, J. H. A., Cobb, N. S., Carneiro, M. A. A., Cornelissen, T., Neves, F. S., Ribeiro, S. P., Nunes, Y. R. F., Pires, A. C. V. & Beirão, M. V., Jan 1 2016, Ecology and Conservation of Mountaintop Grasslands in Brazil. Springer International Publishing, p. 345-378 34 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

18 Scopus citations

Operational Sex Ratio

Shuster, S. M., Apr 14 2016, Encyclopedia of Evolutionary Biology. Elsevier Inc., p. 167-174 8 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

3 Scopus citations

Stress reactivity and exercise in women

Traustadottir, T., Jan 1 2016, Sex Hormones, Exercise and Women: Scientific and Clinical Aspects. Springer International Publishing, p. 193-208 16 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2015

Associations of elevation, vegetation type, and land use with the distribution of the wupatki pocket mouse (perognathus amplus cineris)

Loverich Rieck, J. M., Peterson, S. K. & Theimer, T., Jan 1 2015, The Colorado Plateau VI: Science and Management at the Landscape Scale. University of Arizona Press, p. 233-242 10 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Bee diversity and abundance along an elevational gradient in Northern Arizona

David, R. S., Higgins, J., Burton, J. & Cobb, N. S., Jan 1 2015, The Colorado Plateau VI: Science and Management at the Landscape Scale. University of Arizona Press, p. 159-189 31 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2 Scopus citations

Distance to standing water is negatively correlated with invertebrate biomass, nestling feeding rate, and productivity in southwestern willow flyc atchers (empidonax traillii extimus)

Peterson, D., Pellegrini, A. R., McLeod, M. A. & Theimer, T., Jan 1 2015, The Colorado Plateau VI: Science and Management at the Landscape Scale. University of Arizona Press, p. 262-270 9 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

1 Scopus citations

Effects of introduced bison on wetlands of the kaibab plateau, Arizona

Reimondo, E., Sisk, T. D. & Theimer, T., Jan 1 2015, The Colorado Plateau VI: Science and Management at the Landscape Scale. University of Arizona Press, p. 120-135 16 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Global Change: Biospheric Impacts and Feedbacks

Hungate, B. A. & Koch, G. W., Jan 1 2015, Encyclopedia of Atmospheric Sciences: Second Edition. Elsevier Inc., p. 132-140 9 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

1 Scopus citations

Quantitative histomorphometry and quantitative polymerase chain reaction (PCR) as assessment tools for product development

Audet, R. G., Diller, R. B. & Kellar, R. S., Jun 15 2015, Molecular Histopathology and Tissue Biomarkers in Drug and Diagnostic Development. Springer New York, p. 163-174 12 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Quantitative histopathology for evaluation of in vivo biocompatibility associated with biomedical implants

Diller, R. B., Audet, R. G. & Kellar, R. S., Jun 15 2015, Molecular Histopathology and Tissue Biomarkers in Drug and Diagnostic Development. Springer New York, p. 153-162 10 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

4 Scopus citations

Tamarix and Soil Ecology

Meinhardt, K. A. & Gehring, C. A., May 8 2015, Tamarix: A Case Study of Ecological Change in the American West. Oxford University Press

Research output: Chapter in Book/Report/Conference proceedingChapter

1 Scopus citations
2013

A molecular basis for intrinsic muscle properties: Implications for motor control

Nishikawa, K. C., Monroy, J. A., Powers, K. L., Gilmore, L. A., Uyeno, T. A. & Lindstedt, S. L., 2013, Advances in Experimental Medicine and Biology. Springer New York LLC, Vol. 782. p. 111-125 15 p. (Advances in Experimental Medicine and Biology; vol. 782).

Research output: Chapter in Book/Report/Conference proceedingChapter

13 Scopus citations

Bacterial Variable Number Tandem Repeats

Keim, P. S., Feb 27 2013, Brenner's Encyclopedia of Genetics: Second Edition. Elsevier Inc., p. 274-276 3 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Genotyping (Subtyping) Bacteria

Keim, P. S., Feb 27 2013, Brenner's Encyclopedia of Genetics: Second Edition. Elsevier Inc., p. 321-323 3 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Innovations of the rule-based modeling approach

Chylek, L. A., Stites, E. C., Posner, R. G. & Hlavacek, W. S., Aug 1 2013, Integrative Biology and Simulation Tools. Springer Netherlands, Vol. 1. p. 273-300 28 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

9 Scopus citations

Natural ecosystems

Fleishman, E., Belnap, J., Cobb, N., Enquist, C. A. F., Ford, K., MacDonald, G., Pellant, M., Schoennagel, T., Schmit, L. M., Schwartz, M., van Drunick, S., Westerling, A. L. R., Keyser, A., Lucas, R. & Sabo, J., Jan 1 2013, Assessment of Climate Change in the Southwest United States: A Report Prepared for the National Climate Assessment. Island Press-Center for Resource Economics , p. 148-167 20 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2 Scopus citations

Oxidative insult after ischemia/reperfusion in older adults

Traustadottir, T. & Davies, S. S., Jan 1 2013, Studies on Women's Health. Humana Press Inc., p. 263-284 22 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2012

Dynamic interplay in a multivariate world: Case studies in mycorrhizal and endophytic fungal interactions with herbivores

Lamit, L. J. & Gehring, C. A., Jan 3 2012, Biocomplexity of Plant-Fungal Interactions. Wiley-Blackwell, p. 185-204 20 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2 Scopus citations
2011

Cardiovascular tissue engineering

Kellar, R. S., Lancaster, J. J., Goldman, S., McAllister, T. N. & L'Heureux, N., Oct 1 2011, Comprehensive Biomaterials. Elsevier, Vol. 5. p. 361-376 16 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Coral reef fishes: Opportunities, challenges and concerns

Montgomery, W. L., Dec 1 2011, Coral Reefs: An Ecosystem in Transition. Springer Netherlands, p. 327-346 20 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

3 Scopus citations

Forensic Analysis in Bacterial Pathogens

Okinaka, R. T., Hill, K. H., Pearson, T., Foster, J. T., Vogler, A. J., Tuanyok, A., Wagner, D. M. & Keim, P. S., Dec 1 2011, Microbial Forensics. Elsevier Inc., p. 259-276 18 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

1 Scopus citations

Measuring nitrification, denitrification, and related biomarkers in terrestrial geothermal ecosystems

Dodsworth, J. A., Hungate, B., De La Torre, J. R., Jiang, H. & Hedlund, B. P., Jan 1 2011, Methods in Enzymology. C ed. Academic Press Inc., p. 171-203 33 p. (Methods in Enzymology; vol. 486, no. C).

Research output: Chapter in Book/Report/Conference proceedingChapter

Microbial Forensic Investigation of the Anthrax-Letter Attacks

Keim, P. S., Budowle, B. & Ravel, J., Dec 1 2011, Microbial Forensics. Elsevier Inc., p. 15-25 11 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

7 Scopus citations

Microbial Forensic Investigations in the Context of Bacterial Population Genetics

Keim, P. S., Pearson, T., Budowle, B., Wilson, M. & Wagner, D. M., Dec 1 2011, Microbial Forensics. Elsevier Inc., p. 545-559 15 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

3 Scopus citations

Microbial Forensics: Educating the Workforce and the Community

Schutzer, S. E., Budowle, B. & Keim, P. S., Dec 1 2011, Microbial Forensics. Elsevier Inc., p. 667-680 14 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

6 Scopus citations

Microbial Forensics, What Next?

Keim, P. S., Morse, S. A., Schutzer, S. E., Breeze, R. G. & Budowle, B., Dec 1 2011, Microbial Forensics. Elsevier Inc., p. 693-696 4 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Ricin Forensics: Comparisons to Microbial Forensics

Foster, J. T., Bull, R. L. & Keim, P. S., Dec 1 2011, Microbial Forensics. Elsevier Inc., p. 315-326 12 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Stable isotope probing with 18O-water to investigate growth and mortality of ammonia oxidizing bacteria and archaea in soil

Adair, K. & Schwartz, E., Jan 1 2011, Methods in Enzymology. C ed. Academic Press Inc., p. 155-169 15 p. (Methods in Enzymology; vol. 486, no. C).

Research output: Chapter in Book/Report/Conference proceedingChapter

Testicular Structure and Control of Sperm Development in Amphibians

Propper, C. R., Dec 1 2011, Hormones and Reproduction of Vertebrates - Volume 2. Elsevier Inc., p. 39-53 15 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

11 Scopus citations

The Kameido Anthrax Incident: A Microbial Forensics Case Study

Kaufmann, A. F. & Keim, P. S., Dec 1 2011, Microbial Forensics. Elsevier Inc., p. 5-13 9 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

1 Scopus citations
2010

A community and ecosystem genetics approach to conservation biology andmanagement

Whitham, T. G., Gehring, C. A., Evans, L. M., LeRoy, C. J., Bangert, R. K., Schweitzer, J. A., Allan, G. J., Barbour, R. C., Fischer, D. G., Potts, B. M. & Bailey, J. K., Jan 1 2010, Molecular Approaches in Natural Resource Conservation and Management. Cambridge University Press, p. 50-73 24 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

12 Scopus citations

Population Genetics of Bacillus: Phylogeography of Anthrax in North America

Kenefic, L. J., Okinaka, R. T. & Keim, P., Apr 9 2010, Bacterial Population Genetics in Infectious Disease. John Wiley and Sons, p. 167-180 14 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

3 Scopus citations
2009

Sexual selection and mating systems

Shuster, S. M., Dec 30 2009, Two Centuries of Darwin. National Academy of Sciences, Vol. 3. p. 191-212 22 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Signal Transduction in Avian Intrapulmonary Chemoreceptors: Structure, Evolution and Function

Hempleman, S. C. & Pilarski, J. Q., 2009, Airway Chemoreceptors in the Vertebrates: Structure, Evolution and Function. Zaccone, G., Cutz, E., Adriaensen, D. & Maucerri, A. (eds.). Enfield, New Hampshire, USA: Science Publishers, p. 213-234

Research output: Chapter in Book/Report/Conference proceedingChapter

2008

Ecophysiology

Ferry-Graham, L. A. & Gibb, A. C., Jan 1 2008, Encyclopedia of Ecology, Five-Volume Set. Elsevier Inc., p. 1121-1125 5 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Longstanding Taxonomic Enigmas within the 'Bacillus cereus group' are on the Verge of being Resolved by Far-reaching Molecular Developments: forecasts on the possible outcome by an ad hoc team

Turnbull, P. C. B., Jackson, P. J., Hill, K. K., Keim, P. S., Kolstø, A. B. & Beecher, D. J., Apr 16 2008, Applications and Systematics of Bacillus and Relatives. wiley, p. 23-36 14 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

4 Scopus citations

Mating Systems

Shuster, S. M., Jan 1 2008, Encyclopedia of Ecology, Five-Volume Set. Elsevier Inc., p. 2266-2273 8 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

3 Scopus citations

The expression of crustacean mating strategies

Shuster, S. M., Jan 1 2008, Alternative Reproductive Tactics: An Integrative Approach. Cambridge University Press, p. 224-250 27 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

26 Scopus citations